Detailed information NTG0405459

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: GOQ07_RS09000
• Genome accession: NZ_CP046554
• Coordinates: 1858523..1859224 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 19WIARLN011_full
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1853523..1864224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOQ07_RS08965 (GOQ07_08875)	kdsB	1854046..1854807 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GOQ07_RS08970 (GOQ07_08880)	-	1854819..1855799 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
GOQ07_RS08975 (GOQ07_08885)	-	1855811..1856152 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
GOQ07_RS08980 (GOQ07_08890)	-	1856170..1856943 (+)	774	WP_000497298.1	TatD family hydrolase	-
GOQ07_RS08985 (GOQ07_08895)	-	1856981..1857589 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
GOQ07_RS08990 (GOQ07_08900)	-	1857599..1858153 (+)	555	WP_000841374.1	type II secretion system protein	-
GOQ07_RS08995 (GOQ07_08905)	xcpV	1858143..1858523 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
GOQ07_RS09000 (GOQ07_08910)	xcpW	1858523..1859224 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
GOQ07_RS09005 (GOQ07_08915)	gspK	1859224..1860183 (+)	960	WP_000301468.1	type II secretion system minor pseudopilin GspK	-
GOQ07_RS09010 (GOQ07_08920)	-	1860413..1861009 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
GOQ07_RS09015 (GOQ07_08925)	ung	1861060..1861773 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
GOQ07_RS09020 (GOQ07_08930)	-	1861770..1862894 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
GOQ07_RS09025 (GOQ07_08935)	tadA	1862901..1863404 (+)	504	WP_031954106.1	tRNA adenosine(34) deaminase TadA	-
GOQ07_RS09030 (GOQ07_08940)	-	1863474..1863917 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=405459 GOQ07_RS09000 WP_000594589.1 1858523..1859224(+) (xcpW) [Acinetobacter baumannii strain 19WIARLN011_full]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=405459 GOQ07_RS09000 WP_000594589.1 1858523..1859224(+) (xcpW) [Acinetobacter baumannii strain 19WIARLN011_full]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATTGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGACACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996