Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | GOQ05_RS08845 | Genome accession | NZ_CP046552 |
| Coordinates | 1823155..1823535 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 19WIARLN021_full | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1818155..1828535
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOQ05_RS08815 (GOQ05_08750) | kdsB | 1819058..1819819 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| GOQ05_RS08820 (GOQ05_08755) | - | 1819831..1820811 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| GOQ05_RS08825 (GOQ05_08760) | - | 1820823..1821164 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| GOQ05_RS08830 (GOQ05_08765) | - | 1821182..1821955 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| GOQ05_RS08835 (GOQ05_08770) | - | 1821993..1822601 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| GOQ05_RS08840 (GOQ05_08775) | - | 1822611..1823165 (+) | 555 | WP_000841374.1 | type II secretion system protein | - |
| GOQ05_RS08845 (GOQ05_08780) | xcpV | 1823155..1823535 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| GOQ05_RS08850 (GOQ05_08785) | xcpW | 1823535..1824236 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| GOQ05_RS08855 (GOQ05_08790) | gspK | 1824236..1825195 (+) | 960 | WP_000301468.1 | type II secretion system minor pseudopilin GspK | - |
| GOQ05_RS08860 (GOQ05_08795) | - | 1825425..1826021 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| GOQ05_RS08865 (GOQ05_08800) | ung | 1826072..1826785 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| GOQ05_RS08870 (GOQ05_08805) | - | 1826782..1827906 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| GOQ05_RS08875 (GOQ05_08810) | tadA | 1827913..1828416 (+) | 504 | WP_031954106.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=405409 GOQ05_RS08845 WP_000836911.1 1823155..1823535(+) (xcpV) [Acinetobacter baumannii strain 19WIARLN021_full]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=405409 GOQ05_RS08845 WP_000836911.1 1823155..1823535(+) (xcpV) [Acinetobacter baumannii strain 19WIARLN021_full]
ATGAAATCTAAAGGTTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGTTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |