Detailed information NTG0405410

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: GOQ05_RS08850
• Genome accession: NZ_CP046552
• Coordinates: 1823535..1824236 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 19WIARLN021_full
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1818535..1829236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOQ05_RS08815 (GOQ05_08750)	kdsB	1819058..1819819 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GOQ05_RS08820 (GOQ05_08755)	-	1819831..1820811 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
GOQ05_RS08825 (GOQ05_08760)	-	1820823..1821164 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
GOQ05_RS08830 (GOQ05_08765)	-	1821182..1821955 (+)	774	WP_000497298.1	TatD family hydrolase	-
GOQ05_RS08835 (GOQ05_08770)	-	1821993..1822601 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
GOQ05_RS08840 (GOQ05_08775)	-	1822611..1823165 (+)	555	WP_000841374.1	type II secretion system protein	-
GOQ05_RS08845 (GOQ05_08780)	xcpV	1823155..1823535 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
GOQ05_RS08850 (GOQ05_08785)	xcpW	1823535..1824236 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
GOQ05_RS08855 (GOQ05_08790)	gspK	1824236..1825195 (+)	960	WP_000301468.1	type II secretion system minor pseudopilin GspK	-
GOQ05_RS08860 (GOQ05_08795)	-	1825425..1826021 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
GOQ05_RS08865 (GOQ05_08800)	ung	1826072..1826785 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
GOQ05_RS08870 (GOQ05_08805)	-	1826782..1827906 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
GOQ05_RS08875 (GOQ05_08810)	tadA	1827913..1828416 (+)	504	WP_031954106.1	tRNA adenosine(34) deaminase TadA	-
GOQ05_RS08880 (GOQ05_08815)	-	1828486..1828929 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=405410 GOQ05_RS08850 WP_000594589.1 1823535..1824236(+) (xcpW) [Acinetobacter baumannii strain 19WIARLN021_full]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=405410 GOQ05_RS08850 WP_000594589.1 1823535..1824236(+) (xcpW) [Acinetobacter baumannii strain 19WIARLN021_full]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATTGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGACACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996