Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | GOQ08_RS10285 | Genome accession | NZ_CP046549 |
| Coordinates | 2154428..2154808 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 19WIARLN022_full | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2149428..2159808
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOQ08_RS10255 (GOQ08_10180) | tadA | 2149547..2150050 (-) | 504 | WP_031954106.1 | tRNA adenosine(34) deaminase TadA | - |
| GOQ08_RS10260 (GOQ08_10185) | - | 2150057..2151181 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| GOQ08_RS10265 (GOQ08_10190) | ung | 2151178..2151891 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| GOQ08_RS10270 (GOQ08_10195) | - | 2151942..2152538 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| GOQ08_RS10275 (GOQ08_10200) | gspK | 2152768..2153727 (-) | 960 | WP_000301468.1 | type II secretion system minor pseudopilin GspK | - |
| GOQ08_RS10280 (GOQ08_10205) | xcpW | 2153727..2154428 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| GOQ08_RS10285 (GOQ08_10210) | xcpV | 2154428..2154808 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| GOQ08_RS10290 (GOQ08_10215) | - | 2154798..2155352 (-) | 555 | WP_000841374.1 | type II secretion system protein | - |
| GOQ08_RS10295 (GOQ08_10220) | - | 2155362..2155970 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| GOQ08_RS10300 (GOQ08_10225) | - | 2156008..2156781 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| GOQ08_RS10305 (GOQ08_10230) | - | 2156799..2157140 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| GOQ08_RS10310 (GOQ08_10235) | - | 2157152..2158132 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| GOQ08_RS10315 (GOQ08_10240) | kdsB | 2158144..2158905 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=405358 GOQ08_RS10285 WP_000836911.1 2154428..2154808(-) (xcpV) [Acinetobacter baumannii strain 19WIARLN022_full]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=405358 GOQ08_RS10285 WP_000836911.1 2154428..2154808(-) (xcpV) [Acinetobacter baumannii strain 19WIARLN022_full]
ATGAAATCTAAAGGTTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGTTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |