Detailed information NTG0405357

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: GOQ08_RS10280
• Genome accession: NZ_CP046549
• Coordinates: 2153727..2154428 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 19WIARLN022_full
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2148727..2159428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOQ08_RS10250 (GOQ08_10175)	-	2149034..2149477 (-)	444	WP_001246675.1	SRPBCC family protein	-
GOQ08_RS10255 (GOQ08_10180)	tadA	2149547..2150050 (-)	504	WP_031954106.1	tRNA adenosine(34) deaminase TadA	-
GOQ08_RS10260 (GOQ08_10185)	-	2150057..2151181 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
GOQ08_RS10265 (GOQ08_10190)	ung	2151178..2151891 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
GOQ08_RS10270 (GOQ08_10195)	-	2151942..2152538 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
GOQ08_RS10275 (GOQ08_10200)	gspK	2152768..2153727 (-)	960	WP_000301468.1	type II secretion system minor pseudopilin GspK	-
GOQ08_RS10280 (GOQ08_10205)	xcpW	2153727..2154428 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
GOQ08_RS10285 (GOQ08_10210)	xcpV	2154428..2154808 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
GOQ08_RS10290 (GOQ08_10215)	-	2154798..2155352 (-)	555	WP_000841374.1	type II secretion system protein	-
GOQ08_RS10295 (GOQ08_10220)	-	2155362..2155970 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
GOQ08_RS10300 (GOQ08_10225)	-	2156008..2156781 (-)	774	WP_000497298.1	TatD family hydrolase	-
GOQ08_RS10305 (GOQ08_10230)	-	2156799..2157140 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
GOQ08_RS10310 (GOQ08_10235)	-	2157152..2158132 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
GOQ08_RS10315 (GOQ08_10240)	kdsB	2158144..2158905 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=405357 GOQ08_RS10280 WP_000594589.1 2153727..2154428(-) (xcpW) [Acinetobacter baumannii strain 19WIARLN022_full]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=405357 GOQ08_RS10280 WP_000594589.1 2153727..2154428(-) (xcpW) [Acinetobacter baumannii strain 19WIARLN022_full]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATTGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGACACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996