Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   GOM46_RS06290 Genome accession   NZ_CP046525
Coordinates   1265538..1267403 (-) Length   621 a.a.
NCBI ID   WP_006149818.1    Uniprot ID   F5VYB1
Organism   Streptococcus infantis strain SO     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 1260538..1272403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM46_RS06270 (GOM46_06255) - 1261619..1262893 (-) 1275 WP_006149798.1 hydroxymethylglutaryl-CoA reductase, degradative -
  GOM46_RS06275 (GOM46_06260) - 1262899..1264065 (-) 1167 WP_006149947.1 hydroxymethylglutaryl-CoA synthase -
  GOM46_RS06280 (GOM46_06265) - 1264241..1264690 (-) 450 WP_006149836.1 threonine/serine exporter family protein -
  GOM46_RS06285 (GOM46_06270) - 1264692..1265450 (-) 759 WP_235083351.1 threonine/serine exporter family protein -
  GOM46_RS06290 (GOM46_06275) stkP 1265538..1267403 (-) 1866 WP_006149818.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  GOM46_RS06295 (GOM46_06280) - 1267400..1268137 (-) 738 WP_006149897.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  GOM46_RS06300 (GOM46_06285) rsmB 1268153..1269466 (-) 1314 WP_006149962.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  GOM46_RS06305 (GOM46_06290) fmt 1269459..1270394 (-) 936 WP_006149786.1 methionyl-tRNA formyltransferase -

Sequence


Protein


Download         Length: 621 a.a.        Molecular weight: 68264.21 Da        Isoelectric Point: 9.2913

>NTDB_id=405081 GOM46_RS06290 WP_006149818.1 1265538..1267403(-) (stkP) [Streptococcus infantis strain SO]
MIQIGKIFAGRYRIIKQIGRGGMADVYLAKDLILDGEEVAVKVLRTNYQTDPIAVARFQREARAMADLDHPHIVRITDIG
EEDGQQYLAMEYVAGLDLKRYIKEHYPLSNEEAVRIMGQILLAMRLAHAKGIVHRDLKPQNILLTPDGTAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATIQSDIYAMGIIFFEMLTGHIPYDGDSAVTIALQHFQKPLPSVIAENPSVP
QSLENVVIKATAKKLTDRYQTVSEMYVDLLSSLSYNRRNEPKLVFDDTSKVDTKTLPKMSQSTLTAIPKVQPKEENPQTK
KPNKKVASKETAPKPVKKRRFKARYLVLLASFILVLASLFWIVSKTPATVEIPKVAGQTVAEAKENLKKANFEIGEEKAE
ASDTVEEGRVIRTDPDAGSARKEGTKVNLIISSGQQSFKLGNYVGRKSTDVIAELKGKKVPENLIKVVEEESSETEAGLV
MKQSLPEGTTYDLSKATEIVLTVAKKVTSVSMPSYIGSSLEFTKNNLIQIVGVKEANIEVVEVSTALEGTAEGTVVNQSP
KPGESVDLNTTRIKISIYKPKITTTTNPTISNPSRAETSPQIREPQANQNTTTSDLHRGDN

Nucleotide


Download         Length: 1866 bp        

>NTDB_id=405081 GOM46_RS06290 WP_006149818.1 1265538..1267403(-) (stkP) [Streptococcus infantis strain SO]
ATGATCCAGATCGGCAAGATATTTGCCGGACGATATCGGATTATCAAACAAATTGGCCGCGGAGGGATGGCAGATGTCTA
CCTGGCCAAAGATTTGATTCTGGATGGGGAAGAAGTTGCTGTAAAGGTTTTAAGAACCAACTACCAGACTGACCCAATCG
CTGTTGCGCGTTTTCAGCGTGAAGCTCGTGCGATGGCAGATCTAGATCATCCTCATATCGTTCGAATTACAGATATCGGT
GAAGAAGATGGTCAACAGTACTTAGCTATGGAATATGTAGCTGGTCTTGACCTCAAACGCTATATCAAAGAACACTATCC
TCTATCAAACGAGGAAGCAGTTCGTATCATGGGACAGATTCTCTTGGCTATGCGTTTGGCGCATGCAAAGGGGATTGTTC
ACCGTGATTTGAAACCTCAAAATATTCTCTTGACTCCTGATGGTACTGCGAAAGTTACAGACTTTGGGATTGCAGTAGCC
TTCGCAGAAACCAGTTTGACACAGACCAACTCTATGTTGGGTTCTGTCCACTATCTATCACCTGAGCAGGCGCGTGGTTC
TAAGGCAACTATTCAGAGTGATATTTATGCGATGGGAATTATTTTCTTTGAAATGTTGACCGGTCATATTCCATATGATG
GAGATAGTGCTGTTACGATTGCACTTCAGCATTTCCAAAAACCACTTCCTTCAGTCATCGCAGAAAATCCATCGGTGCCA
CAATCATTGGAAAATGTGGTCATTAAAGCGACAGCTAAAAAATTAACAGACCGTTATCAAACAGTTTCTGAGATGTATGT
TGACTTGTTGAGTAGTCTTTCATACAATCGTCGCAATGAACCAAAGCTAGTATTTGACGATACAAGTAAGGTTGATACAA
AAACCTTACCAAAGATGTCCCAATCTACTCTGACTGCGATTCCTAAAGTTCAACCGAAGGAAGAAAATCCTCAGACTAAA
AAGCCAAATAAAAAGGTAGCAAGTAAAGAAACTGCTCCAAAACCAGTCAAGAAACGCCGTTTCAAAGCAAGATATTTGGT
ACTTTTAGCTAGCTTTATACTTGTTTTGGCTTCCCTTTTCTGGATTGTATCGAAAACACCAGCTACTGTTGAAATTCCAA
AAGTTGCAGGTCAAACTGTAGCTGAAGCTAAGGAAAACCTGAAAAAAGCGAATTTTGAGATTGGTGAGGAGAAGGCCGAA
GCTAGTGATACTGTAGAAGAAGGTCGAGTTATCCGAACAGATCCAGATGCTGGCTCAGCACGAAAAGAAGGAACAAAAGT
TAATCTTATTATCTCTTCAGGTCAACAATCCTTCAAGCTTGGAAATTATGTTGGTCGTAAATCAACAGATGTTATAGCAG
AATTGAAAGGGAAAAAGGTTCCTGAAAATCTCATCAAGGTTGTTGAAGAAGAATCAAGTGAAACAGAGGCAGGTCTCGTT
ATGAAACAAAGCTTGCCAGAAGGAACTACATATGATCTTAGTAAGGCAACAGAAATAGTCTTGACTGTAGCTAAAAAGGT
AACTAGTGTTTCAATGCCAAGTTATATTGGTTCTAGTCTTGAATTCACCAAGAATAACTTGATTCAGATAGTCGGTGTTA
AAGAAGCCAATATTGAAGTGGTAGAGGTTTCTACAGCTCTAGAAGGAACTGCCGAGGGTACAGTTGTTAACCAAAGTCCA
AAACCAGGTGAAAGTGTAGATTTGAATACAACTCGTATCAAGATTTCCATCTATAAACCGAAAATAACTACAACAACAAA
TCCTACAATAAGCAATCCTAGTCGTGCAGAAACATCTCCACAGATTAGAGAACCACAGGCTAATCAAAACACTACAACGT
CAGATTTGCATCGAGGGGATAACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F5VYB1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

76.949

95.008

0.731

  stkP Streptococcus pneumoniae Rx1

76.441

95.008

0.726

  stkP Streptococcus pneumoniae D39

75.885

95.491

0.725

  stkP Streptococcus pneumoniae R6

75.885

95.491

0.725

  pknB Streptococcus mutans UA159

55.786

93.237

0.52

  stkP/pknB Streptococcus salivarius strain HSISS4

53.39

95.008

0.507


Multiple sequence alignment