Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GOM46_RS03760 Genome accession   NZ_CP046525
Coordinates   760544..761353 (+) Length   269 a.a.
NCBI ID   WP_006150622.1    Uniprot ID   F5W0F5
Organism   Streptococcus infantis strain SO     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 755544..766353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM46_RS03745 (GOM46_03720) mutY 757270..758427 (+) 1158 WP_235084092.1 A/G-specific adenine glycosylase -
  GOM46_RS03750 (GOM46_03725) micA 758496..759200 (+) 705 WP_235084093.1 response regulator YycF Regulator
  GOM46_RS03755 (GOM46_03730) micB 759193..760542 (+) 1350 WP_235084094.1 cell wall metabolism sensor histidine kinase VicK Regulator
  GOM46_RS03760 (GOM46_03735) vicX 760544..761353 (+) 810 WP_006150622.1 MBL fold metallo-hydrolase Regulator
  GOM46_RS03765 (GOM46_03740) - 761390..761737 (-) 348 WP_006150616.1 thiol reductase thioredoxin -
  GOM46_RS03770 (GOM46_03745) - 761846..763564 (-) 1719 WP_006150600.1 phospho-sugar mutase -
  GOM46_RS03775 (GOM46_03750) - 763716..765617 (+) 1902 WP_235084095.1 ABC-F family ATP-binding cassette domain-containing protein -
  GOM46_RS03785 (GOM46_03760) mscL 765832..766209 (-) 378 WP_178895090.1 large conductance mechanosensitive channel protein MscL -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29876.76 Da        Isoelectric Point: 5.9877

>NTDB_id=405069 GOM46_RS03760 WP_006150622.1 760544..761353(+) (vicX) [Streptococcus infantis strain SO]
MSETGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLGEINRKPEDLDAILITHEHTDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFQVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=405069 GOM46_RS03760 WP_006150622.1 760544..761353(+) (vicX) [Streptococcus infantis strain SO]
ATGAGTGAAACAGGCTTTAAATATAGTATTTTAGCATCGGGTTCTAGTGGGAATTCCTTCTATCTAGAAACCCCTAAGAA
AAAGATTTTAGTGGATGCCGGCTTATCCGGTAAAAAAATCACAAGTTTATTAGGTGAAATCAATCGTAAACCAGAAGATT
TGGATGCGATATTAATCACGCATGAACACACGGATCACATACATGGTGTTGGAGTTTTAGCGCGTAAATATGGCATGGAC
CTCTATGCCAATGAGAAAACTTGGCAAGCTATGGAAAATAGTAAGTACTTAGGTAAAGTTGATTCTTCTCAAAAGCATAT
TTTTGAAATGGGAAAAACCAAAACATTTGGAGATATTGATATCGAGAGTTTTGGTGTTAGTCATGATGCGGCAGCTCCCC
AATTCTATCGTTTTATGAAGGACGATAAGAGTTTCGTCATGCTGACAGATACAGGTTATGTCAGTGACCGTATGGCTGGT
ATCGTTGAAAATGCAGATGGCTACCTTATCGAGTCAAATCATGATGTAGAAATTTTGCGAGCTGGATCTTATGCTTGGCG
ACTCAAACAACGGATTCTTTCTGACCTCGGTCACCTTTCGAATGAAGATGGTGCAGATGCAATGATACGTACACTTGGTA
ATCGTACCAAAAAAATCTACTTGGGACATTTATCAAAGGAAAACAATATCAAGGAGCTTGCCCACATGACCATGGTCAAT
CAGCTAGCTCAAGCGGATCTCGGTGTAGGAGTAGATTTTCAAGTTTATGATACGTCTCCTGATACCGCAACACCATTGAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5W0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.695

100

0.777

Multiple sequence alignment