Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | GOM46_RS02380 | Genome accession | NZ_CP046525 |
| Coordinates | 468601..469833 (+) | Length | 410 a.a. |
| NCBI ID | WP_006145154.1 | Uniprot ID | A0A1S1GYW6 |
| Organism | Streptococcus infantis strain SO | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 463601..474833
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOM46_RS02360 (GOM46_02345) | - | 465319..467100 (+) | 1782 | WP_235083884.1 | ABC transporter ATP-binding protein | - |
| GOM46_RS02365 (GOM46_02350) | - | 467247..467765 (+) | 519 | WP_235083885.1 | Dps family protein | - |
| GOM46_RS02370 (GOM46_02355) | - | 467893..468399 (+) | 507 | WP_235083886.1 | dihydrofolate reductase | - |
| GOM46_RS02375 (GOM46_02360) | - | 468399..468569 (+) | 171 | WP_000442253.1 | hypothetical protein | - |
| GOM46_RS02380 (GOM46_02365) | clpX | 468601..469833 (+) | 1233 | WP_006145154.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| GOM46_RS02385 (GOM46_02370) | yihA | 469842..470429 (+) | 588 | WP_006150399.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| GOM46_RS02390 (GOM46_02375) | - | 470439..470819 (+) | 381 | WP_001140424.1 | RidA family protein | - |
| GOM46_RS02395 (GOM46_02380) | rapZ | 470871..471761 (+) | 891 | WP_235083887.1 | RNase adapter RapZ | - |
| GOM46_RS02400 (GOM46_02385) | - | 471758..472735 (+) | 978 | WP_235083888.1 | YvcK family protein | - |
| GOM46_RS02405 (GOM46_02390) | whiA | 472732..473643 (+) | 912 | WP_235083889.1 | DNA-binding protein WhiA | - |
| GOM46_RS02410 (GOM46_02395) | - | 473675..474643 (-) | 969 | WP_235083890.1 | NAD(P)/FAD-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 410 a.a. Molecular weight: 45644.18 Da Isoelectric Point: 4.4806
>NTDB_id=405059 GOM46_RS02380 WP_006145154.1 468601..469833(+) (clpX) [Streptococcus infantis strain SO]
MPTNRKNDMMVYCSFCGKSQEEVKKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLARSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKTVRITKEAVD
GTAKPILETA
MPTNRKNDMMVYCSFCGKSQEEVKKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLARSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKTVRITKEAVD
GTAKPILETA
Nucleotide
Download Length: 1233 bp
>NTDB_id=405059 GOM46_RS02380 WP_006145154.1 468601..469833(+) (clpX) [Streptococcus infantis strain SO]
ATGCCTACAAATAGGAAAAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAGCCAAGAAGAAGTTAAAAAAATAAT
CGCTGGGAACAACGCTTTTATCTGTAATGAGTGTGTGGAGTTAGCCCAGGAAATCATTCGTGAGGAGTTGGCAGAGGAAG
TCCTAGCAGACTTGTCTGAAGTACCAAAACCAATCGAACTCTTAAACATCTTGAACCACTATGTGATTGGTCAAGATCGT
GCCAAACGTGCCTTGGCAGTAGCTGTATATAACCACTACAAACGCATCAATTTCCATGACACTCGTGAAGAGTCAGAAGA
TGTAGATTTGCAAAAATCAAATATTTTGATGATTGGTCCAACTGGTTCAGGGAAGACTTTCCTTGCTCAAACACTTGCTA
GAAGTTTAAATGTACCTTTTGCCATTGCAGATGCAACAGCTCTTACTGAGGCTGGTTATGTTGGTGAGGACGTGGAAAAT
ATTCTCCTCAAACTCTTGCAAGCTGCTGACTTTAACATCGAACGTGCAGAACGTGGAATTATCTACGTAGACGAAATCGA
CAAGATTGCCAAGAAGAGCGAGAATGTTTCTATCACACGTGATGTATCTGGTGAAGGGGTGCAACAAGCCCTTCTCAAGA
TTATCGAAGGAACTGTAGCCAGCGTACCACCTCAAGGTGGACGCAAACATCCACAACAAGAAATGATTCAAGTGGACACT
AAAAATATCCTCTTTATCGTGGGTGGTGCCTTCGATGGCATCGAAGAGATTGTCAAACAGCGTCTAGGTGAAAAAGTGAT
TGGTTTCGGACAAAACAACAAGGCCATTGATGAAAATAGTTCTTACATGCAAGAAATCATCGCAGAAGATATTCAAAAAT
TCGGTATTATTCCTGAGTTGATTGGACGCTTGCCTGTCTTTGCAGCCTTGGAGCAGTTGACTGTAGATGATTTGGTTCGT
ATCTTGAAGGAACCAAGAAATGCTTTGGTTAAACAATACCAGACCTTGCTTTCTTATGATGATGTGGAGCTTGAATTTGA
CGACGAAGCTCTCCAAGAAATTGCTAACAAAGCAATCGAACGTAAGACTGGTGCGCGTGGTCTTCGCTCAATCATCGAAG
AAACTATGCTAGACGTAATGTTTGAAGTTCCAAGTCAAGAAAATGTGAAAACAGTTCGTATCACAAAAGAAGCGGTTGAC
GGAACGGCTAAGCCAATTCTAGAGACAGCCTAG
ATGCCTACAAATAGGAAAAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAGCCAAGAAGAAGTTAAAAAAATAAT
CGCTGGGAACAACGCTTTTATCTGTAATGAGTGTGTGGAGTTAGCCCAGGAAATCATTCGTGAGGAGTTGGCAGAGGAAG
TCCTAGCAGACTTGTCTGAAGTACCAAAACCAATCGAACTCTTAAACATCTTGAACCACTATGTGATTGGTCAAGATCGT
GCCAAACGTGCCTTGGCAGTAGCTGTATATAACCACTACAAACGCATCAATTTCCATGACACTCGTGAAGAGTCAGAAGA
TGTAGATTTGCAAAAATCAAATATTTTGATGATTGGTCCAACTGGTTCAGGGAAGACTTTCCTTGCTCAAACACTTGCTA
GAAGTTTAAATGTACCTTTTGCCATTGCAGATGCAACAGCTCTTACTGAGGCTGGTTATGTTGGTGAGGACGTGGAAAAT
ATTCTCCTCAAACTCTTGCAAGCTGCTGACTTTAACATCGAACGTGCAGAACGTGGAATTATCTACGTAGACGAAATCGA
CAAGATTGCCAAGAAGAGCGAGAATGTTTCTATCACACGTGATGTATCTGGTGAAGGGGTGCAACAAGCCCTTCTCAAGA
TTATCGAAGGAACTGTAGCCAGCGTACCACCTCAAGGTGGACGCAAACATCCACAACAAGAAATGATTCAAGTGGACACT
AAAAATATCCTCTTTATCGTGGGTGGTGCCTTCGATGGCATCGAAGAGATTGTCAAACAGCGTCTAGGTGAAAAAGTGAT
TGGTTTCGGACAAAACAACAAGGCCATTGATGAAAATAGTTCTTACATGCAAGAAATCATCGCAGAAGATATTCAAAAAT
TCGGTATTATTCCTGAGTTGATTGGACGCTTGCCTGTCTTTGCAGCCTTGGAGCAGTTGACTGTAGATGATTTGGTTCGT
ATCTTGAAGGAACCAAGAAATGCTTTGGTTAAACAATACCAGACCTTGCTTTCTTATGATGATGTGGAGCTTGAATTTGA
CGACGAAGCTCTCCAAGAAATTGCTAACAAAGCAATCGAACGTAAGACTGGTGCGCGTGGTCTTCGCTCAATCATCGAAG
AAACTATGCTAGACGTAATGTTTGAAGTTCCAAGTCAAGAAAATGTGAAAACAGTTCGTATCACAAAAGAAGCGGTTGAC
GGAACGGCTAAGCCAATTCTAGAGACAGCCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
86.829 |
100 |
0.868 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.463 |
98.049 |
0.563 |