Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | GOM46_RS01330 | Genome accession | NZ_CP046525 |
| Coordinates | 261729..262766 (+) | Length | 345 a.a. |
| NCBI ID | WP_235083735.1 | Uniprot ID | - |
| Organism | Streptococcus infantis strain SO | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 256729..267766
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOM46_RS01295 (GOM46_01280) | yidC | 256784..257710 (-) | 927 | WP_235083732.1 | membrane protein insertase YidC | - |
| GOM46_RS01300 (GOM46_01285) | - | 257788..258066 (-) | 279 | WP_001174501.1 | acylphosphatase | - |
| GOM46_RS01305 (GOM46_01290) | - | 258100..258840 (+) | 741 | WP_025169994.1 | TrmH family RNA methyltransferase | - |
| GOM46_RS01310 (GOM46_01295) | - | 258894..259577 (+) | 684 | WP_235083733.1 | Bax inhibitor-1 family protein | - |
| GOM46_RS01315 (GOM46_01300) | asnA | 259675..260667 (+) | 993 | WP_006150123.1 | aspartate--ammonia ligase | - |
| GOM46_RS01320 (GOM46_01305) | rsmD | 260728..261267 (+) | 540 | WP_006150185.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| GOM46_RS01325 (GOM46_01310) | coaD | 261257..261745 (+) | 489 | WP_235083734.1 | pantetheine-phosphate adenylyltransferase | - |
| GOM46_RS01330 (GOM46_01315) | sepM | 261729..262766 (+) | 1038 | WP_235083735.1 | SepM family pheromone-processing serine protease | Regulator |
| GOM46_RS01335 (GOM46_01320) | - | 262824..263054 (+) | 231 | WP_033685906.1 | DUF1146 family protein | - |
| GOM46_RS01340 (GOM46_01325) | murA | 263079..264365 (+) | 1287 | WP_235083736.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| GOM46_RS01345 (GOM46_01330) | - | 264358..264546 (+) | 189 | WP_006150292.1 | DNA-directed RNA polymerase subunit beta | - |
| GOM46_RS01350 (GOM46_01335) | endA | 264592..265419 (+) | 828 | WP_006150172.1 | DNA/RNA non-specific endonuclease | Machinery gene |
| GOM46_RS01355 (GOM46_01340) | - | 265538..266869 (+) | 1332 | WP_006150075.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 37654.06 Da Isoelectric Point: 6.1031
>NTDB_id=405042 GOM46_RS01330 WP_235083735.1 261729..262766(+) (sepM) [Streptococcus infantis strain SO]
MKKKTRWPIYLIIGLIITFIAFTVPLPYYIEVPGTSEDIRKVLQVNNQADQEEGSYQFVTVGVKHARLVDLVYAWLTPFT
DIRSAKEMTGGSSDAEFMRINQFYMETSQNMAKYQGLKAAGKEIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
ESSKEMVDYVNSQTLGDKVKVTYQEDGKVKTAEGKIITLENGKNGIGIGLIDRTEVSSDVPIKFSTAGIGGPSAGLMFSL
SIYTQIADPTLRNGRIIAGTGSIDRDGNVGDIGGIDKKVVAAAKKGATVFFAPNNPITEEAKKANPNAKSNYDTAVEAAE
MIKTDMKIVPVKTLQDAIDYLKNNP
MKKKTRWPIYLIIGLIITFIAFTVPLPYYIEVPGTSEDIRKVLQVNNQADQEEGSYQFVTVGVKHARLVDLVYAWLTPFT
DIRSAKEMTGGSSDAEFMRINQFYMETSQNMAKYQGLKAAGKEIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
ESSKEMVDYVNSQTLGDKVKVTYQEDGKVKTAEGKIITLENGKNGIGIGLIDRTEVSSDVPIKFSTAGIGGPSAGLMFSL
SIYTQIADPTLRNGRIIAGTGSIDRDGNVGDIGGIDKKVVAAAKKGATVFFAPNNPITEEAKKANPNAKSNYDTAVEAAE
MIKTDMKIVPVKTLQDAIDYLKNNP
Nucleotide
Download Length: 1038 bp
>NTDB_id=405042 GOM46_RS01330 WP_235083735.1 261729..262766(+) (sepM) [Streptococcus infantis strain SO]
ATGAAGAAAAAAACTAGATGGCCCATATATTTAATCATCGGGCTTATTATCACTTTTATAGCTTTTACGGTACCACTTCC
TTATTACATTGAGGTTCCAGGGACTTCAGAAGATATTCGAAAAGTCTTACAAGTCAATAATCAAGCTGACCAAGAGGAAG
GTTCCTATCAATTTGTGACAGTTGGGGTTAAACATGCTAGACTGGTGGACTTGGTTTATGCTTGGCTGACGCCTTTTACG
GATATTCGAAGTGCTAAAGAGATGACAGGTGGTTCTTCAGATGCAGAATTTATGCGAATCAACCAGTTTTACATGGAAAC
TTCGCAGAACATGGCCAAATATCAAGGACTCAAGGCAGCTGGTAAGGAAATAGAGCTCAAATATCTGGGCGTCTATGTTT
TGACTGTGACAGACAATTCAACTTTTAAGGGTATTCTGAATATTGCTGATACTGTGACAGCGGTGAATGATAAGACTTTT
GAAAGCTCCAAGGAGATGGTCGACTACGTCAATTCTCAAACTCTTGGAGATAAGGTTAAGGTTACTTACCAAGAGGATGG
GAAAGTAAAAACAGCTGAAGGAAAAATCATTACTCTGGAAAATGGGAAAAACGGTATCGGAATCGGTTTGATTGACCGCA
CGGAAGTGTCAAGTGATGTGCCAATCAAGTTTTCAACTGCAGGCATTGGTGGTCCGAGTGCTGGGCTGATGTTTAGCTTG
TCTATTTATACACAAATTGCAGACCCAACCCTTCGAAATGGACGGATTATTGCCGGTACAGGAAGTATCGACAGAGATGG
AAATGTTGGTGATATTGGTGGAATTGACAAAAAAGTTGTTGCTGCTGCAAAAAAAGGAGCTACTGTATTCTTTGCTCCAA
ACAATCCAATAACTGAAGAAGCTAAAAAGGCAAATCCAAACGCCAAAAGTAATTATGACACGGCTGTAGAAGCTGCTGAA
ATGATTAAAACAGACATGAAGATTGTCCCAGTAAAAACACTTCAGGATGCAATTGATTACTTGAAAAACAACCCATAA
ATGAAGAAAAAAACTAGATGGCCCATATATTTAATCATCGGGCTTATTATCACTTTTATAGCTTTTACGGTACCACTTCC
TTATTACATTGAGGTTCCAGGGACTTCAGAAGATATTCGAAAAGTCTTACAAGTCAATAATCAAGCTGACCAAGAGGAAG
GTTCCTATCAATTTGTGACAGTTGGGGTTAAACATGCTAGACTGGTGGACTTGGTTTATGCTTGGCTGACGCCTTTTACG
GATATTCGAAGTGCTAAAGAGATGACAGGTGGTTCTTCAGATGCAGAATTTATGCGAATCAACCAGTTTTACATGGAAAC
TTCGCAGAACATGGCCAAATATCAAGGACTCAAGGCAGCTGGTAAGGAAATAGAGCTCAAATATCTGGGCGTCTATGTTT
TGACTGTGACAGACAATTCAACTTTTAAGGGTATTCTGAATATTGCTGATACTGTGACAGCGGTGAATGATAAGACTTTT
GAAAGCTCCAAGGAGATGGTCGACTACGTCAATTCTCAAACTCTTGGAGATAAGGTTAAGGTTACTTACCAAGAGGATGG
GAAAGTAAAAACAGCTGAAGGAAAAATCATTACTCTGGAAAATGGGAAAAACGGTATCGGAATCGGTTTGATTGACCGCA
CGGAAGTGTCAAGTGATGTGCCAATCAAGTTTTCAACTGCAGGCATTGGTGGTCCGAGTGCTGGGCTGATGTTTAGCTTG
TCTATTTATACACAAATTGCAGACCCAACCCTTCGAAATGGACGGATTATTGCCGGTACAGGAAGTATCGACAGAGATGG
AAATGTTGGTGATATTGGTGGAATTGACAAAAAAGTTGTTGCTGCTGCAAAAAAAGGAGCTACTGTATTCTTTGCTCCAA
ACAATCCAATAACTGAAGAAGCTAAAAAGGCAAATCCAAACGCCAAAAGTAATTATGACACGGCTGTAGAAGCTGCTGAA
ATGATTAAAACAGACATGAAGATTGTCCCAGTAAAAACACTTCAGGATGCAATTGATTACTTGAAAAACAACCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
59.064 |
99.13 |
0.586 |