Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   GOM47_RS08440 Genome accession   NZ_CP046524
Coordinates   1697986..1699242 (-) Length   418 a.a.
NCBI ID   WP_235080526.1    Uniprot ID   -
Organism   Streptococcus oralis strain SOT     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1692986..1704242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM47_RS08425 (GOM47_08430) - 1694043..1694456 (+) 414 WP_235080523.1 EamA family transporter -
  GOM47_RS08430 (GOM47_08435) - 1694631..1696010 (-) 1380 WP_235080524.1 glycoside hydrolase family 1 protein -
  GOM47_RS08435 (GOM47_08440) - 1696116..1697969 (-) 1854 WP_235080525.1 proline--tRNA ligase -
  GOM47_RS08440 (GOM47_08445) eeP 1697986..1699242 (-) 1257 WP_235080526.1 RIP metalloprotease RseP Regulator
  GOM47_RS08445 (GOM47_08450) - 1699258..1700061 (-) 804 WP_235080527.1 phosphatidate cytidylyltransferase -
  GOM47_RS08450 (GOM47_08455) - 1700070..1700828 (-) 759 WP_235080528.1 isoprenyl transferase -
  GOM47_RS08455 (GOM47_08460) - 1701038..1701622 (-) 585 WP_235080529.1 nucleotidyltransferase family protein -
  GOM47_RS08460 (GOM47_08465) ruvB 1701603..1702601 (-) 999 WP_321159574.1 Holliday junction branch migration DNA helicase RuvB -

Sequence


Protein


Download         Length: 418 a.a.        Molecular weight: 45625.25 Da        Isoelectric Point: 5.9329

>NTDB_id=405014 GOM47_RS08440 WP_235080526.1 1697986..1699242(-) (eeP) [Streptococcus oralis strain SOT]
MIGLLTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDATEIKT
GTPVSLTLADDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTIAVDHDATVVEADGTEVRIAPLDVQY
QNASIWGKLITNFAGPMNNFILGVVVFWILIFLQGGVRDTQTNLFHVMPEGALAKVGVAETAQITKVGSHEVKNWQDLTQ
AVEADTKDKTAPTLDVTISENGSEKQVTVTPEENQGRYILGVQPGVKSDFLSMFVGGFTTAADSGLRILSALKNLIFHPD
LNKLGGPVAIFKASSDAAKNGIENVLYFLAMISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTMAGVVI
MVVLMLAVTWNDIMRLFF

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=405014 GOM47_RS08440 WP_235080526.1 1697986..1699242(-) (eeP) [Streptococcus oralis strain SOT]
ATGATTGGATTGCTAACCTTTATCCTAGTTTTTGGGATTATCGTGGTGGTGCATGAGTTTGGACATTTTTATTTTGCCAA
GAAATCAGGCATTTTAGTTCGTGAATTTGCTATTGGTATGGGCCCCAAGATTTTTGCCCATATCGGTAAGGATGGCACTG
CTTATACCATTCGGATCCTTCCTTTAGGAGGATATGTTCGTATGGCTGGTTGGGGCGATGATGCGACGGAAATCAAGACA
GGAACCCCGGTCAGTTTAACGCTTGCTGATGATGGTAAGGTCAAACGAATCAACCTCTCAGGGAAGAAGCTGGATCAAAC
AGCTCTCCCTATGCAGGTAACCCAGTTTGATTTCGAAGATAAGCTCTTCATTAAAGGCTTGGTCTTGGAAGAAGAAAAGA
CCATTGCTGTGGATCACGATGCAACAGTTGTTGAGGCGGATGGTACTGAAGTACGCATCGCTCCTCTGGATGTACAGTAT
CAAAATGCTTCTATCTGGGGCAAGCTCATCACCAACTTTGCGGGTCCTATGAATAACTTTATCTTAGGTGTTGTTGTTTT
TTGGATCTTGATCTTTTTGCAAGGCGGTGTTAGAGATACTCAGACCAATCTCTTTCACGTCATGCCAGAGGGCGCTTTGG
CTAAGGTGGGTGTAGCTGAGACCGCTCAAATTACCAAGGTCGGCTCTCACGAGGTTAAGAATTGGCAAGACTTGACCCAG
GCTGTGGAAGCAGATACCAAGGACAAGACTGCCCCGACCTTGGATGTGACCATTTCTGAAAATGGTAGCGAAAAACAAGT
CACTGTGACTCCAGAAGAAAATCAAGGACGTTATATTCTTGGGGTTCAACCGGGAGTCAAGTCAGACTTTCTATCCATGT
TTGTTGGTGGATTTACAACCGCTGCTGACTCAGGGCTCCGTATCCTTTCGGCTCTGAAAAACTTGATTTTCCATCCAGAT
TTGAACAAACTCGGCGGTCCCGTTGCCATTTTTAAGGCAAGTAGCGATGCTGCTAAAAATGGAATTGAGAATGTCCTCTA
CTTCCTAGCTATGATTTCCATCAATATCGGGATTTTTAACTTGATTCCGATCCCGGCTTTGGATGGTGGAAAGATTGTGC
TCAATATCCTAGAGGCTATCCGCCGGAAACCCCTTAAACAAGAAATTGAAACCTATGTCACCATGGCTGGTGTAGTTATC
ATGGTTGTTTTGATGCTAGCTGTGACCTGGAATGACATTATGCGACTCTTCTTTTAG

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.571

100

0.639

  eeP Streptococcus thermophilus LMG 18311

63.333

100

0.636


Multiple sequence alignment