Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   GOM48_RS08615 Genome accession   NZ_CP046523
Coordinates   1717176..1718432 (-) Length   418 a.a.
NCBI ID   WP_235097147.1    Uniprot ID   -
Organism   Streptococcus oralis strain SOD     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1712176..1723432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM48_RS08600 (GOM48_08540) tnpA 1713160..1713674 (+) 515 Protein_1673 IS200/IS605 family transposase -
  GOM48_RS08605 (GOM48_08545) - 1713819..1715198 (-) 1380 WP_235097145.1 glycoside hydrolase family 1 protein -
  GOM48_RS08610 (GOM48_08550) - 1715306..1717159 (-) 1854 WP_235097146.1 proline--tRNA ligase -
  GOM48_RS08615 (GOM48_08555) eeP 1717176..1718432 (-) 1257 WP_235097147.1 RIP metalloprotease RseP Regulator
  GOM48_RS08620 (GOM48_08560) - 1718448..1719251 (-) 804 WP_235097148.1 phosphatidate cytidylyltransferase -
  GOM48_RS08625 (GOM48_08565) - 1719260..1720018 (-) 759 WP_038805815.1 isoprenyl transferase -
  GOM48_RS08630 (GOM48_08570) - 1720437..1721201 (-) 765 WP_235097149.1 amino acid ABC transporter ATP-binding protein -
  GOM48_RS08635 (GOM48_08575) - 1721211..1721933 (-) 723 WP_235097150.1 amino acid ABC transporter permease -
  GOM48_RS08640 (GOM48_08580) - 1721937..1722629 (-) 693 WP_235097151.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 418 a.a.        Molecular weight: 45713.31 Da        Isoelectric Point: 5.6830

>NTDB_id=404943 GOM48_RS08615 WP_235097147.1 1717176..1718432(-) (eeP) [Streptococcus oralis strain SOD]
MIGLLTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGDDATEIKT
GTPVSLTLTDDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFAVDHDATVVEADGTEVRIAPLDVQY
QNASIWGKLITNFAGPMNNFILGVVVFWILIFLQGGVRDTQTNLFHVMPEGALAKVGVAETAQITKVGSHEVKNWQDLTQ
AVEADTKDKTAPTLDVTISENGSEKQVTVTPEENQGRYILGVQPEVKSDLLSMFVGGFTTAADSGLRILSALKNLIFHPD
LNKLGGPVAIFKASSDAAKNGLENVLYFLAVISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTMAGVVI
MVVLMLAVTWNDIMRLFF

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=404943 GOM48_RS08615 WP_235097147.1 1717176..1718432(-) (eeP) [Streptococcus oralis strain SOD]
ATGATTGGATTGCTAACCTTTATCCTCGTTTTTGGGATTATTGTGGTGGTGCATGAGTTTGGACATTTTTATTTTGCCAA
GAAATCAGGCATTTTAGTTCGTGAATTTGCCATTGGTATGGGGCCCAAGATTTTTGCCCATATTGGTAAGGATGGCACTG
CTTATACCATTCGGATGCTCCCTCTAGGTGGCTACGTTCGTATGGCTGGTTGGGGCGATGATGCGACAGAAATCAAGACA
GGAACCCCAGTCAGTTTAACACTTACTGATGATGGTAAGGTCAAACGGATCAACCTCTCAGGGAAGAAACTGGATCAAAC
AGCTCTCCCTATGCAGGTAACCCAGTTTGATTTCGAAGACAAGCTCTTCATTAAAGGCTTGGTCTTGGAAGAAGAAAAGA
CCTTTGCTGTGGATCATGATGCAACAGTTGTTGAGGCGGATGGTACCGAAGTACGCATCGCTCCTCTGGATGTACAGTAT
CAAAATGCTTCTATCTGGGGTAAGCTCATCACCAACTTTGCAGGTCCTATGAATAACTTTATCTTAGGTGTTGTTGTTTT
TTGGATCTTGATCTTTTTACAAGGTGGTGTTAGAGATACTCAAACCAATCTCTTTCATGTCATGCCAGAGGGAGCATTGG
CTAAGGTGGGTGTAGCTGAGACCGCTCAAATTACCAAGGTCGGCTCGCATGAGGTTAAGAATTGGCAAGACTTAACCCAG
GCTGTGGAAGCAGATACCAAGGACAAGACCGCCCCGACCTTGGATGTGACCATTTCTGAAAATGGTAGCGAAAAACAAGT
CACGGTGACTCCAGAAGAGAATCAAGGACGTTATATTCTTGGGGTTCAACCGGAAGTCAAGTCAGACCTCCTATCCATGT
TTGTTGGTGGATTTACAACCGCTGCTGACTCAGGGCTCCGTATCCTTTCGGCTCTGAAAAACTTGATTTTCCATCCAGAT
TTGAACAAACTCGGTGGTCCCGTTGCCATTTTTAAGGCAAGTAGCGATGCTGCTAAAAATGGTCTTGAGAATGTCCTCTA
TTTCCTAGCTGTGATTTCCATCAATATCGGGATTTTTAACTTGATTCCTATCCCGGCTTTGGATGGTGGAAAGATTGTGC
TCAATATCCTAGAGGCTATCCGCCGGAAACCCCTTAAACAAGAAATTGAAACCTATGTCACCATGGCTGGTGTAGTTATC
ATGGTTGTCTTGATGCTAGCTGTGACCTGGAATGACATTATGCGACTCTTCTTTTAG

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.571

100

0.639

  eeP Streptococcus thermophilus LMG 18311

63.333

100

0.636


Multiple sequence alignment