Detailed information
Bioinformatically predicted
Overview
| Name | degQ | Type | Regulator |
| Locus tag | GFX43_RS05875 | Genome accession | NZ_CP046448 |
| Coordinates | 1154233..1154373 (+) | Length | 46 a.a. |
| NCBI ID | WP_003220708.1 | Uniprot ID | G4P060 |
| Organism | Bacillus subtilis strain ZD01 | ||
| Function | modification of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1149233..1159373
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFX43_RS05850 (GFX43_005850) | yueI | 1149527..1149925 (+) | 399 | WP_015483635.1 | YueI family protein | - |
| GFX43_RS05855 (GFX43_005855) | pncA | 1150022..1150573 (+) | 552 | WP_014477836.1 | isochorismatase family cysteine hydrolase | - |
| GFX43_RS05860 (GFX43_005860) | pncB | 1150589..1152061 (+) | 1473 | WP_003228788.1 | nicotinate phosphoribosyltransferase | - |
| GFX43_RS05865 (GFX43_005865) | pdeH | 1152198..1153427 (+) | 1230 | WP_003243525.1 | cyclic di-GMP phosphodiesterase | - |
| GFX43_RS05870 (GFX43_005870) | - | 1153403..1153771 (-) | 369 | WP_015483634.1 | hypothetical protein | - |
| GFX43_RS20655 | - | 1153949..1154011 (-) | 63 | Protein_1141 | hypothetical protein | - |
| GFX43_RS05875 (GFX43_005875) | degQ | 1154233..1154373 (+) | 141 | WP_003220708.1 | degradation enzyme regulation protein DegQ | Regulator |
| GFX43_RS05880 (GFX43_005880) | - | 1154558..1155418 (+) | 861 | WP_015483633.1 | polyprenyl synthetase family protein | - |
| GFX43_RS05885 (GFX43_005885) | comX | 1155431..1155595 (+) | 165 | WP_015384519.1 | competence pheromone ComX | - |
| GFX43_RS05890 (GFX43_005890) | comP | 1155607..1157907 (+) | 2301 | WP_046340263.1 | histidine kinase | Regulator |
| GFX43_RS05895 (GFX43_005895) | comA | 1157988..1158632 (+) | 645 | WP_003220716.1 | two-component system response regulator ComA | Regulator |
| GFX43_RS05900 (GFX43_005900) | yuxO | 1158650..1159030 (+) | 381 | WP_015483631.1 | hotdog fold thioesterase | - |
Sequence
Protein
Download Length: 46 a.a. Molecular weight: 5546.44 Da Isoelectric Point: 6.2559
>NTDB_id=404378 GFX43_RS05875 WP_003220708.1 1154233..1154373(+) (degQ) [Bacillus subtilis strain ZD01]
MEKKLEEVKQLLFRLELDIKETTDSLRNINKSIDQLDKYNYAMKIS
MEKKLEEVKQLLFRLELDIKETTDSLRNINKSIDQLDKYNYAMKIS
Nucleotide
Download Length: 141 bp
>NTDB_id=404378 GFX43_RS05875 WP_003220708.1 1154233..1154373(+) (degQ) [Bacillus subtilis strain ZD01]
ATGGAAAAGAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCGAACTTGATATTAAAGAAACGACAGATTCATTACG
AAACATTAACAAAAGCATTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA
ATGGAAAAGAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCGAACTTGATATTAAAGAAACGACAGATTCATTACG
AAACATTAACAAAAGCATTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degQ | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |