Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   GNT61_RS02145 Genome accession   NZ_CP046405
Coordinates   458036..458443 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain SE5443     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 453036..463443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GNT61_RS02115 (GNT61_02105) - 453084..454088 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  GNT61_RS02120 (GNT61_02110) pyrR 454112..454624 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  GNT61_RS02125 (GNT61_02115) ruvX 454736..455170 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  GNT61_RS02130 (GNT61_02120) - 455170..455739 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  GNT61_RS02135 (GNT61_02125) - 455788..456681 (-) 894 WP_003084580.1 TonB family protein -
  GNT61_RS02140 (GNT61_02130) gshB 456828..457781 (-) 954 WP_003100943.1 glutathione synthase -
  GNT61_RS02145 (GNT61_02135) pilG 458036..458443 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  GNT61_RS02150 (GNT61_02140) pilH 458490..458855 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  GNT61_RS02155 (GNT61_02145) - 458906..459442 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  GNT61_RS02160 (GNT61_02150) pilJ 459527..461575 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  GNT61_RS02165 (GNT61_02155) pilK 461636..462511 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=404055 GNT61_RS02145 WP_003084583.1 458036..458443(+) (pilG) [Pseudomonas aeruginosa strain SE5443]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=404055 GNT61_RS02145 WP_003084583.1 458036..458443(+) (pilG) [Pseudomonas aeruginosa strain SE5443]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment