Detailed information NTG0403783

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GK020_RS01230
• Genome accession: NZ_CP046392
• Coordinates: 266942..268297 (-)
• Length: 451 a.a.
• NCBI ID: WP_264757081.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain WMB-7
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 261942..273297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GK020_RS01215	lptG	262996..264066 (+)	1071	WP_045795380.1	LPS export ABC transporter permease LptG	-
GK020_RS01220	gpmI	264185..265732 (+)	1548	WP_087662538.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
GK020_RS01225	-	265756..266925 (+)	1170	WP_087662537.1	S41 family peptidase	-
GK020_RS01230	pilR	266942..268297 (-)	1356	WP_264757081.1	sigma-54-dependent transcriptional regulator	Regulator
GK020_RS01235	pilS	268369..269937 (-)	1569	WP_087662535.1	sensor histidine kinase	Regulator
GK020_RS01240	-	269952..270587 (-)	636	WP_005181577.1	response regulator	-
GK020_RS01245	-	270805..271887 (+)	1083	WP_125523564.1	serine hydrolase	-
GK020_RS01250	thrC	271981..273126 (-)	1146	WP_045796493.1	threonine synthase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50645.30 Da
• Isoelectric Point: 6.5620

>NTDB_id=403783 GK020_RS01230 WP_264757081.1 266942..268297(-) (pilR) [Acinetobacter indicus strain WMB-7]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPSDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIDSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPETDTATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=403783 GK020_RS01230 WP_264757081.1 266942..268297(-) (pilR) [Acinetobacter indicus strain WMB-7]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCATTATGACGCCTGCATCACTGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGTTGTTTAA
AGCACATAGTCAGGAAGCGGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTGCCAATTCAGCAACTGCGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCGGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGTAACCGCAGTGACGGGCCTTTTATTGCCATTAACTGTGGCGCCATTCCAAGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATTCAGTCAGCACACG
GCGGTAGCCTGTTCTTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATCAGCGCCAGCCATCAGGACCTTGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGCTGCCACCGCTACGTG
AGCGCGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATAGACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTGCGCAATATCATTGAACG
CGCCATGACTTTGAGTGATGATGATGTGATTGATCTGCCGCATCTGCAAACTGCACCGTTACGCAAGATGGCGCCGCTGG
CAGAACCAGAAACCGACACCGCAACGCCGGTTACAGCCGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCGCTGAATCTGACTCATTGGAACCGGACTTTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTAAAGAAATTCGGGCTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Response regulator receiver domain (Response_reg) (3-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.836	100	0.738
pilR	Pseudomonas aeruginosa PAK	50.557	99.557	0.503