Detailed information NTG0403437

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: HWD38_RS14510
• Genome accession: NZ_CP056114
• Coordinates: 3002213..3003238 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Ec394-330266
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2997213..3008238

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HWD38_RS14480 (HWD38_14300)	zapB	2997297..2997542 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
HWD38_RS14485 (HWD38_14305)	rraA	2997627..2998112 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
HWD38_RS14490 (HWD38_14310)	menA	2998205..2999131 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
HWD38_RS14495 (HWD38_14315)	hslU	2999198..3000529 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
HWD38_RS14500 (HWD38_14320)	hslV	3000539..3001069 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
HWD38_RS14505 (HWD38_14325)	ftsN	3001162..3002121 (-)	960	WP_000068834.1	cell division protein FtsN	-
HWD38_RS14510 (HWD38_14330)	cytR	3002213..3003238 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
HWD38_RS14515 (HWD38_14335)	priA	3003394..3005592 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
HWD38_RS14520 (HWD38_14340)	rpmE	3005795..3006007 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
HWD38_RS14525 (HWD38_14345)	yiiX	3006068..3006676 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
HWD38_RS14530 (HWD38_14350)	metJ	3006736..3007053 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=403437 HWD38_RS14510 WP_000644908.1 3002213..3003238(-) (cytR) [Escherichia coli strain Ec394-330266]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=403437 HWD38_RS14510 WP_000644908.1 3002213..3003238(-) (cytR) [Escherichia coli strain Ec394-330266]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625