Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   GL183_RS01590 Genome accession   NZ_CP046355
Coordinates   306011..306631 (+) Length   206 a.a.
NCBI ID   WP_000839909.1    Uniprot ID   A0A098Z2X2
Organism   Streptococcus pneumoniae strain 475     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 301011..311631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GL183_RS01570 (GL183_01595) - 301307..301939 (-) 633 WP_000571415.1 ABC transporter ATP-binding protein -
  GL183_RS01575 (GL183_01600) - 301941..303956 (-) 2016 WP_000732385.1 DUF1430 domain-containing protein -
  GL183_RS01580 (GL183_01605) - 304406..304576 (-) 171 WP_000742180.1 PhrA family quorum-sensing system peptide -
  GL183_RS01585 (GL183_01610) - 304765..305628 (+) 864 WP_024477662.1 helix-turn-helix transcriptional regulator -
  GL183_RS01590 (GL183_01615) comM 306011..306631 (+) 621 WP_000839909.1 hypothetical protein Regulator
  GL183_RS01595 (GL183_01620) tsaE 306717..307160 (+) 444 WP_000288232.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GL183_RS01600 (GL183_01625) - 307150..307668 (+) 519 WP_024477661.1 GNAT family N-acetyltransferase -
  GL183_RS01605 (GL183_01630) - 307676..308692 (+) 1017 WP_000239278.1 LCP family protein -
  GL183_RS01610 (GL183_01635) cinA 308777..310033 (+) 1257 WP_000642706.1 competence/damage-inducible protein A Machinery gene
  GL183_RS01615 (GL183_01640) recA 310088..311254 (+) 1167 WP_001085463.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23540.66 Da        Isoelectric Point: 10.1254

>NTDB_id=403020 GL183_RS01590 WP_000839909.1 306011..306631(+) (comM) [Streptococcus pneumoniae strain 475]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYTGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=403020 GL183_RS01590 WP_000839909.1 306011..306631(+) (comM) [Streptococcus pneumoniae strain 475]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATACTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A098Z2X2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

99.515

100

0.995
  comM Streptococcus pneumoniae R6

99.515

100

0.995
  comM Streptococcus pneumoniae TIGR4

99.515

100

0.995
  comM Streptococcus mitis NCTC 12261

38.462

94.66

0.364
  comM Streptococcus mitis SK321

38.462

94.66

0.364

Multiple sequence alignment