Detailed information NTG0402882

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: HVV27_RS09170
• Genome accession: NZ_CP055246
• Coordinates: 1844174..1845280 (+)
• Length: 368 a.a.
• NCBI ID: WP_011529146.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain TSPY767
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1839174..1850280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HVV27_RS09145 (HVV27_09145)	pgsA	1839283..1839825 (-)	543	WP_011185104.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
HVV27_RS09150 (HVV27_09150)	-	1839839..1840864 (-)	1026	WP_011529142.1	RodZ family helix-turn-helix domain-containing protein	-
HVV27_RS09155 (HVV27_09155)	yfmH	1840914..1842203 (-)	1290	WP_011529143.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
HVV27_RS09160 (HVV27_09160)	yfmF	1842205..1843449 (-)	1245	WP_011529144.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
HVV27_RS09165 (HVV27_09165)	yaaA	1843759..1844172 (+)	414	WP_021299130.1	S4 domain-containing protein YaaA	-
HVV27_RS09170 (HVV27_09170)	recF	1844174..1845280 (+)	1107	WP_011529146.1	DNA replication/repair protein RecF	Machinery gene
HVV27_RS09175 (HVV27_09175)	-	1845336..1846199 (-)	864	WP_060388547.1	GRP family sugar transporter	-
HVV27_RS09180 (HVV27_09180)	guaB	1846402..1847883 (-)	1482	WP_011529148.1	IMP dehydrogenase	-
HVV27_RS09185 (HVV27_09185)	trpS	1848191..1849213 (-)	1023	WP_011529149.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41844.78 Da
• Isoelectric Point: 7.8294

>NTDB_id=402882 HVV27_RS09170 WP_011529146.1 1844174..1845280(+) (recF) [Streptococcus pyogenes strain TSPY767]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRISGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLFELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGARVMEHRIDFINALEKEANTHHQAISNGLESLSLSYQSSVVFDKKTSIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTVQVDSDIH

Nucleotide

• Length: 1107 bp

>NTDB_id=402882 HVV27_RS09170 WP_011529146.1 1844174..1845280(+) (recF) [Streptococcus pyogenes strain TSPY767]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCGTCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTATTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGTGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTCGCACCAGAAGATTTGCAACTAGTTAAGGGAGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAGCCTGTTTACTTATTTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAACAAATTGATGCCGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAGC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCGTTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAGTCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAAAACTAGTATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTTGGTCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGGATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCGTTCAAGTTGATTCTGACATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	62.568	99.457	0.622
recF	Bacillus subtilis subsp. subtilis str. 168	45.013	100	0.454