Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SALIVA_RS04910 Genome accession   NC_017595
Coordinates   1011316..1011798 (+) Length   160 a.a.
NCBI ID   WP_002885066.1    Uniprot ID   -
Organism   Streptococcus salivarius JIM8777     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1006316..1016798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVA_RS04890 (SALIVA_1000) queG 1007189..1008307 (+) 1119 WP_014634420.1 tRNA epoxyqueuosine(34) reductase QueG -
  SALIVA_RS04895 (SALIVA_1002) prfB 1008360..1009458 (+) 1099 WP_096833329.1 peptide chain release factor 2 -
  SALIVA_RS04900 (SALIVA_1003) ftsE 1009546..1010238 (+) 693 WP_014634421.1 cell division ATP-binding protein FtsE -
  SALIVA_RS04905 (SALIVA_1004) ftsX 1010231..1011160 (+) 930 WP_003092823.1 permease-like cell division protein FtsX -
  SALIVA_RS04910 (SALIVA_1005) mutX 1011316..1011798 (+) 483 WP_002885066.1 8-oxo-dGTP diphosphatase Machinery gene
  SALIVA_RS04915 (SALIVA_1006) - 1011808..1012986 (+) 1179 WP_014634422.1 AI-2E family transporter -
  SALIVA_RS04920 (SALIVA_1007) - 1012976..1014205 (+) 1230 WP_041826668.1 tetratricopeptide repeat protein -
  SALIVA_RS04925 (SALIVA_1008) lepB 1014327..1014884 (+) 558 WP_002884860.1 signal peptidase I -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18793.15 Da        Isoelectric Point: 4.4433

>NTDB_id=40287 SALIVA_RS04910 WP_002885066.1 1011316..1011798(+) (mutX) [Streptococcus salivarius JIM8777]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDKPFFSAKFVYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=40287 SALIVA_RS04910 WP_002885066.1 1011316..1011798(+) (mutX) [Streptococcus salivarius JIM8777]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCCGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCTTATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTACGAGATCTTCAAGTGGATTCTTGAAG
ATAAGCCTTTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAACTTAGTAGACAAGACTGTAACCTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.956

99.375

0.725

Multiple sequence alignment