Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   FOB92_RS07880 Genome accession   NZ_CP046335
Coordinates   1636226..1636858 (-) Length   210 a.a.
NCBI ID   WP_000970273.1    Uniprot ID   -
Organism   Streptococcus mitis strain FDAARGOS_684     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1631226..1641858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB92_RS07855 (FOB92_07855) recA 1631573..1632727 (-) 1155 WP_078228268.1 recombinase RecA Machinery gene
  FOB92_RS07860 (FOB92_07860) cinA 1632782..1634038 (-) 1257 WP_000642690.1 competence/damage-inducible protein A Machinery gene
  FOB92_RS07865 (FOB92_07865) brpA 1634116..1635171 (-) 1056 WP_000239266.1 biofilm formation/cell division transcriptional regulator BrpA -
  FOB92_RS07870 (FOB92_07870) - 1635179..1635697 (-) 519 WP_000455549.1 GNAT family N-acetyltransferase -
  FOB92_RS07875 (FOB92_07875) tsaE 1635687..1636130 (-) 444 WP_000288249.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FOB92_RS07880 (FOB92_07880) comM 1636226..1636858 (-) 633 WP_000970273.1 hypothetical protein Regulator
  FOB92_RS07885 (FOB92_07885) ndk 1636988..1637410 (-) 423 WP_004239114.1 nucleoside-diphosphate kinase -
  FOB92_RS07890 (FOB92_07890) rpoC 1637716..1641393 (-) 3678 WP_000228758.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 24055.23 Da        Isoelectric Point: 9.2991

>NTDB_id=402832 FOB92_RS07880 WP_000970273.1 1636226..1636858(-) (comM) [Streptococcus mitis strain FDAARGOS_684]
MMEKMKKQIRVLLLLTVFGLSSCSCLSLSTWALMLNQNCFYYLVGMLLLASIGAGLNYYRGQGNQHYSVFKEDKQQFLYS
LLLLVNILGLALIVIEHILAGNTSVEGFVEAFLPSFFFLFGIDLLVFLPIQKYVNGVKKFLGKKEICFISGLAILIFLRN
PWMLLSMTFYIALGMLFLGLLVPKVIRWEVSFYSHLMRDILLVVFLLFLF

Nucleotide


Download         Length: 633 bp        

>NTDB_id=402832 FOB92_RS07880 WP_000970273.1 1636226..1636858(-) (comM) [Streptococcus mitis strain FDAARGOS_684]
ATGATGGAAAAAATGAAAAAGCAAATTCGAGTTTTGTTATTGCTGACAGTTTTTGGTCTTAGCAGCTGTTCTTGTTTAAG
TTTATCTACTTGGGCCTTGATGTTAAATCAAAACTGCTTCTATTATTTAGTTGGCATGTTGCTTCTTGCCAGTATTGGTG
CAGGGCTAAACTATTATAGAGGGCAGGGAAATCAACATTATTCAGTTTTTAAGGAAGATAAGCAACAATTCTTGTATAGT
CTCTTGCTCTTAGTAAATATTTTGGGTTTAGCTTTAATTGTCATAGAACATATCCTTGCAGGAAATACATCCGTAGAAGG
ATTTGTGGAAGCCTTTCTACCGAGTTTCTTTTTCTTATTTGGGATTGATTTGTTAGTTTTTCTGCCGATTCAGAAGTATG
TAAATGGAGTGAAAAAGTTTTTGGGAAAGAAGGAAATCTGTTTTATTAGTGGACTAGCTATTCTAATCTTTCTCAGAAAT
CCTTGGATGCTATTGTCCATGACCTTTTATATTGCCTTGGGGATGCTATTTCTAGGACTGTTGGTGCCAAAAGTCATTCG
CTGGGAAGTTTCATTTTACAGTCATTTGATGAGAGATATCTTGTTAGTTGTCTTCTTACTGTTTCTATTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus mitis NCTC 12261

100

100

1
  comM Streptococcus mitis SK321

92.965

94.762

0.881
  comM Streptococcus pneumoniae D39

39.024

97.619

0.381
  comM Streptococcus pneumoniae R6

39.024

97.619

0.381
  comM Streptococcus pneumoniae TIGR4

39.024

97.619

0.381

Multiple sequence alignment