Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   FOB92_RS01375 Genome accession   NZ_CP046335
Coordinates   274099..275166 (+) Length   355 a.a.
NCBI ID   WP_000159550.1    Uniprot ID   F9HAA0
Organism   Streptococcus mitis strain FDAARGOS_684     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 269099..280166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB92_RS01360 (FOB92_01360) amiA3 269613..271601 (+) 1989 WP_000749582.1 peptide ABC transporter substrate-binding protein Regulator
  FOB92_RS01365 (FOB92_01365) amiC 271668..273164 (+) 1497 WP_000759915.1 ABC transporter permease Regulator
  FOB92_RS01370 (FOB92_01370) amiD 273164..274090 (+) 927 WP_000103691.1 oligopeptide ABC transporter permease OppC Regulator
  FOB92_RS01375 (FOB92_01375) amiE 274099..275166 (+) 1068 WP_000159550.1 ABC transporter ATP-binding protein Regulator
  FOB92_RS01380 (FOB92_01380) amiF 275177..276103 (+) 927 WP_001291284.1 ATP-binding cassette domain-containing protein Regulator
  FOB92_RS01385 (FOB92_01385) - 276507..277385 (-) 879 WP_001049302.1 LysR family transcriptional regulator -
  FOB92_RS01390 (FOB92_01390) - 277513..277863 (-) 351 WP_000208711.1 helix-turn-helix domain-containing protein -
  FOB92_RS01395 (FOB92_01395) - 278137..279762 (+) 1626 WP_000200491.1 malolactic enzyme -
  FOB92_RS01400 (FOB92_01400) - 279964..280083 (+) 120 Protein_240 IS630 family transposase -

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39491.07 Da        Isoelectric Point: 4.8078

>NTDB_id=402790 FOB92_RS01375 WP_000159550.1 274099..275166(+) (amiE) [Streptococcus mitis strain FDAARGOS_684]
MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSIDYRGQDL
TALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGIPDADRRFDEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQIDFEQKAPQFSVSETHWAK
TWLLHEDAPKVEKPAVIANLHDKIREKMGFAHLAD

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=402790 FOB92_RS01375 WP_000159550.1 274099..275166(+) (amiE) [Streptococcus mitis strain FDAARGOS_684]
ATGACAAAAGAAAAAAATGTAATTTTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTATTGACAGC
CATTCGCGGCGTTTCCCTTGAACTAGTTGAAGGAGAAGTATTAGCCTTGGTAGGTGAGTCAGGATCAGGGAAATCTGTTT
TGACAAAGACATTCACAGGTATGCTTGAAGAAAACGGTCGCATTGCCCAAGGTAGTATTGACTACCGTGGTCAAGATTTG
ACAGCTTTATCTTCTCACAAGGATTGGGAACAAATTCGTGGCGCTAAGATTGCGACTATCTTCCAAGATCCAATGACTAG
TTTGGACCCAATTAAAACAATTGGTAGTCAGATTACAGAAGTTATTGTAAAACACCAAGGAAAAACAGCTAAAGAAGCGA
AAGAATTGGCCATTGACTACATGAATAAGGTTGGGATTCCAGATGCAGATAGACGTTTTGATGAATACCCATTCCAATAT
TCTGGAGGAATGCGTCAACGTATCGTTATTGCGATTGCTCTTGCCTGCCGACCTGATGTCTTGATTTGTGATGAGCCAAC
GACTGCCTTGGATGTGACCATCCAAGCTCAGATTATTGATTTGTTGAAATCTTTACAAAACGAGTACCATTTCACAACAA
TCTTTATCACCCACGACCTTGGTGTGGTGGCAAGTATTGCAGATAAGGTAGCGGTTATGTATGCAGGAGAAATCGTTGAG
TATGGAACTGTTGAGGAAGTCTTCTATGACCCTCGCCATCCATATACATGGAGTCTCTTGTCTAGCTTGCCTCAGCTTGC
TGATGATAAAGGGGATCTTTACTCAATCCCAGGAACACCTCCGTCACTTTATACTGACCTGAAAGGTGATGCCTTTGCCT
TGCGTTCTGACTATGCAATGCAGATTGACTTCGAACAAAAAGCTCCTCAATTCTCAGTATCAGAGACACATTGGGCTAAA
ACTTGGCTACTTCATGAGGATGCTCCAAAAGTAGAAAAACCAGCTGTGATTGCAAATCTCCATGATAAGATTCGTGAAAA
AATGGGATTTGCCCATCTGGCTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9HAA0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

87.887

100

0.879

  amiE Streptococcus thermophilus LMG 18311

86.197

100

0.862

  amiE Streptococcus thermophilus LMD-9

86.197

100

0.862

  oppD Streptococcus mutans UA159

54.261

99.155

0.538


Multiple sequence alignment