Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FOB91_RS10650 Genome accession   NZ_CP046328
Coordinates   2190546..2191349 (+) Length   267 a.a.
NCBI ID   WP_008809002.1    Uniprot ID   A8AWC0
Organism   Streptococcus gordonii strain FDAARGOS_683     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2185546..2196349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB91_RS10765 (FOB91_10630) - 2185886..2186257 (+) 372 WP_012000239.1 hypothetical protein -
  FOB91_RS10635 (FOB91_10635) thrS 2186349..2188292 (+) 1944 WP_012000240.1 threonine--tRNA ligase -
  FOB91_RS10640 (FOB91_10640) micA 2188498..2189199 (+) 702 WP_012000241.1 response regulator YycF Regulator
  FOB91_RS10645 (FOB91_10645) micB 2189192..2190553 (+) 1362 WP_008809003.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FOB91_RS10650 (FOB91_10650) vicX 2190546..2191349 (+) 804 WP_008809002.1 MBL fold metallo-hydrolase Regulator
  FOB91_RS10655 (FOB91_10655) - 2191384..2191740 (+) 357 WP_008809001.1 YbaN family protein -
  FOB91_RS10660 (FOB91_10660) rnc 2191983..2192681 (+) 699 WP_012000242.1 ribonuclease III -
  FOB91_RS10665 (FOB91_10665) smc 2192672..2196205 (+) 3534 WP_012000243.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29688.63 Da        Isoelectric Point: 5.9427

>NTDB_id=402727 FOB91_RS10650 WP_008809002.1 2190546..2191349(+) (vicX) [Streptococcus gordonii strain FDAARGOS_683]
MTKEGFKYSILASGSSGNCFYLETAQKKILVDAGLSGKKITSLLSEINRKPEDLDAILVTHEHKDHIHGVGVLARKYNLD
IYANEDTWKAMDSALGKIDISQKHIFEMGKVMTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGVV
ENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGADTMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLAVNHDFQVLDTSPDTATPLTSI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=402727 FOB91_RS10650 WP_008809002.1 2190546..2191349(+) (vicX) [Streptococcus gordonii strain FDAARGOS_683]
ATGACTAAGGAAGGTTTTAAGTATAGCATTTTAGCATCTGGATCTAGTGGTAATTGTTTTTATTTAGAAACAGCCCAAAA
GAAGATTTTAGTGGATGCGGGACTATCTGGTAAAAAAATCACTAGTCTCCTAAGTGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATTTTAGTAACTCATGAACATAAGGATCACATTCATGGTGTTGGGGTCTTAGCCCGCAAGTATAATTTAGAT
ATCTATGCTAATGAAGATACTTGGAAAGCTATGGATAGTGCCTTAGGGAAAATTGATATCAGCCAAAAGCATATTTTTGA
AATGGGTAAGGTTATGACTTTTGGTGATATAGATATTGAAAGTTTTGGTGTTAGCCATGATGCGGCGGCACCACAATTTT
ATCGGTTTATGAAAGACGATAAAAGCTTTGTCATGCTGACGGATACGGGCTATGTGAGTGACCGTATGGCTGGAGTAGTT
GAAAATGCTGATGGTTACTTGATTGAGAGTAATCATGATGTAGAAATTTTGCGTAGTGGAGCTTACCCTTGGAGTCTTAA
GCAACGTATTTTATCCGATAAAGGCCACTTATCTAATGAAGATGGTGCTGATACGATGATTCGAACCTTGGGGAACCGTA
CCAAAAAGATTTATCTAGGTCACTTGAGTAAGGAGAATAATATCAAGGAGCTTGCTCATATGACTATGGTTAATCAGCTG
GCTCAAGCTGACTTGGCAGTCAATCATGACTTTCAAGTTTTGGATACTTCGCCAGATACAGCTACGCCTCTGACATCAAT
TTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AWC0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.524

100

0.805

Multiple sequence alignment