Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | FOB91_RS05975 | Genome accession | NZ_CP046328 |
| Coordinates | 1222411..1224840 (-) | Length | 809 a.a. |
| NCBI ID | WP_012130976.1 | Uniprot ID | - |
| Organism | Streptococcus gordonii strain FDAARGOS_683 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1217411..1229840
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB91_RS05950 (FOB91_05950) | dusB | 1217536..1218513 (+) | 978 | WP_041789808.1 | tRNA dihydrouridine synthase DusB | - |
| FOB91_RS05955 (FOB91_05955) | - | 1218553..1219227 (-) | 675 | WP_012130972.1 | hypothetical protein | - |
| FOB91_RS05960 (FOB91_05960) | - | 1219464..1220252 (-) | 789 | WP_012130973.1 | NUDIX domain-containing protein | - |
| FOB91_RS05965 (FOB91_05965) | pnuC | 1220296..1221111 (-) | 816 | WP_012130974.1 | nicotinamide riboside transporter PnuC | - |
| FOB91_RS05970 (FOB91_05970) | - | 1221133..1222191 (-) | 1059 | WP_012130975.1 | AAA family ATPase | - |
| FOB91_RS05975 (FOB91_05975) | clpC | 1222411..1224840 (-) | 2430 | WP_012130976.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| FOB91_RS05980 (FOB91_05980) | - | 1224847..1225305 (-) | 459 | WP_012130977.1 | CtsR family transcriptional regulator | - |
| FOB91_RS05985 (FOB91_05985) | - | 1225624..1225974 (+) | 351 | WP_041789810.1 | hypothetical protein | - |
| FOB91_RS05990 (FOB91_05990) | tsf | 1226082..1227125 (-) | 1044 | WP_012130978.1 | translation elongation factor Ts | - |
| FOB91_RS05995 (FOB91_05995) | rpsB | 1227204..1227986 (-) | 783 | WP_008809924.1 | 30S ribosomal protein S2 | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 90163.99 Da Isoelectric Point: 6.5945
>NTDB_id=402696 FOB91_RS05975 WP_012130976.1 1222411..1224840(-) (clpC) [Streptococcus gordonii strain FDAARGOS_683]
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGRFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHKVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLSRLIEKENQPLLSDLRVEEADIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMIKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIA
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGRFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGVLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHKVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLSRLIEKENQPLLSDLRVEEADIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKTYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMIKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIA
Nucleotide
Download Length: 2430 bp
>NTDB_id=402696 FOB91_RS05975 WP_012130976.1 1222411..1224840(-) (clpC) [Streptococcus gordonii strain FDAARGOS_683]
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGTCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTTTTAAACGATTATCCGCTAGAAA
TTGATCATTTTGAGGATGCTGCTTACCATGTGGTAGGGAAATCTTATCAGAAGGAAGGGCGATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
CATCTTATACGCTATCATCAGCGATAGAGGTACCCTAGCAACTCGTATTTTGGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGAAGAAATCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTAGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTCTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCACACGAACTAGCCAAAATGCGGGTTTTAGA
GCTTGATTTAATGAATGTAGTCGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAGCGTATGAACAATATCATCGATGATA
TTGAGAAAGATGGTAAGGTCATTCTCTTTATCGATGAGCTTCATACGATTATGGGATCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGGCGCTTTGCTAAGATCAGTATTGAAGAACCAAGTGTGGCTGACA
GCATTGCTATCCTTAAGGGCCTAAAAGAAAACTATGAAGCCCATCATAAGGTAACGATTACAGATCAAGCCATTGAAACA
GCAGTAAAATATGCCCACCGTTATTTGACAAGTAAGCATCTGCCTGATTCAGCAATTGATCTGTTAGATGAAGCGAGTGC
CACAGTACGTAACAATGGTCCTCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAACTTAGTCGCTTGATCGAGAAAGAAAATCAACCTCTGTTAAGTGATTTAAGAGTAGAGGAAGCAGATATTCTG
ACAACCCTAAGTCGGCTGTCTGGTATTCCAGTTCAAAAATTGACCCAGACAGATGCTAAGAAGTATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGTCAAGATGAAGCTATCTCAGCTATTAGTCGTGCAATCCGTCGTAACCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGACCAACTGGAGTTGGTAAGACCGAGTTGGCTAAGGCT
TTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCTGCTAG
CCGTCTCAATGGAGCGCCTCCAGGCTACGTCGGCTATGAAGAAGGAGGCGAATTAACAGAGAAAGTTCGCAACCGACCAT
ATTCCGTCCTCTTATTTGATGAAGTGGAAAAAGCTCATCCAGATATTTTCAATGTCCTTCTGCAGGTTTTAGATGATGGT
GTATTAACTGATAGTAAGGGACGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGTAACCTAGGTGCAACCAG
TCTGCGTGATGATAAGACAGTTGGCTTTGGGGCTCGCGACATCCGTTTAGACCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCTGCTGAC
CATATGCAGGAGGTTGTAAAAGTGATGATTAAGCCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAACTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGCTATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTGACAGGTGATTTACAAGCAGGCCAGACCTTGAAGGTGGGAGTTAAG
GCAGGTCAGTTGAAGTTTGATATAGCCTAA
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGTCATTTTGAATCTGAGTATTTAGA
GTCATGGCATCTCTTGATTGCTTTTTCTAATTATCCGTACAGCGTAGCAGGCTCAGTTTTAAACGATTATCCGCTAGAAA
TTGATCATTTTGAGGATGCTGCTTACCATGTGGTAGGGAAATCTTATCAGAAGGAAGGGCGATTTAGTATCCTGCCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
CATCTTATACGCTATCATCAGCGATAGAGGTACCCTAGCAACTCGTATTTTGGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGAGTCTTGCGTATTAATGATTTGCGAAGAAATCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCA
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGTCTAGAAGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTAGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGGGATGCTGGAGTTGGTAAA
ACTGCTCTAGCTCTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCACACGAACTAGCCAAAATGCGGGTTTTAGA
GCTTGATTTAATGAATGTAGTCGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAGCGTATGAACAATATCATCGATGATA
TTGAGAAAGATGGTAAGGTCATTCTCTTTATCGATGAGCTTCATACGATTATGGGATCTGGTAGCGGTATTGACTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGGCGCTTTGCTAAGATCAGTATTGAAGAACCAAGTGTGGCTGACA
GCATTGCTATCCTTAAGGGCCTAAAAGAAAACTATGAAGCCCATCATAAGGTAACGATTACAGATCAAGCCATTGAAACA
GCAGTAAAATATGCCCACCGTTATTTGACAAGTAAGCATCTGCCTGATTCAGCAATTGATCTGTTAGATGAAGCGAGTGC
CACAGTACGTAACAATGGTCCTCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAACTTAGTCGCTTGATCGAGAAAGAAAATCAACCTCTGTTAAGTGATTTAAGAGTAGAGGAAGCAGATATTCTG
ACAACCCTAAGTCGGCTGTCTGGTATTCCAGTTCAAAAATTGACCCAGACAGATGCTAAGAAGTATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGTCAAGATGAAGCTATCTCAGCTATTAGTCGTGCAATCCGTCGTAACCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGACCAACTGGAGTTGGTAAGACCGAGTTGGCTAAGGCT
TTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATACATGGAGAAATTTGCTGCTAG
CCGTCTCAATGGAGCGCCTCCAGGCTACGTCGGCTATGAAGAAGGAGGCGAATTAACAGAGAAAGTTCGCAACCGACCAT
ATTCCGTCCTCTTATTTGATGAAGTGGAAAAAGCTCATCCAGATATTTTCAATGTCCTTCTGCAGGTTTTAGATGATGGT
GTATTAACTGATAGTAAGGGACGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGTAACCTAGGTGCAACCAG
TCTGCGTGATGATAAGACAGTTGGCTTTGGGGCTCGCGACATCCGTTTAGACCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTCAAAAAGACATACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCTGCTGAC
CATATGCAGGAGGTTGTAAAAGTGATGATTAAGCCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAACTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGCTATGATGTAGAAATGGGGGCTAGACCTCTTCGTAGGACTCTGCAAA
CCAAAGTTGAAGACAAACTAGCAGAACTGCTATTGACAGGTGATTTACAAGCAGGCCAGACCTTGAAGGTGGGAGTTAAG
GCAGGTCAGTTGAAGTTTGATATAGCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
78.298 |
100 |
0.785 |
| clpC | Streptococcus pneumoniae D39 |
78.298 |
100 |
0.785 |
| clpC | Streptococcus pneumoniae TIGR4 |
78.298 |
100 |
0.785 |
| clpC | Streptococcus mutans UA159 |
67.75 |
98.888 |
0.67 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.298 |
100 |
0.666 |
| clpC | Streptococcus thermophilus LMD-9 |
66.175 |
100 |
0.665 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.161 |
100 |
0.507 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.994 |
100 |
0.461 |
| clpE | Streptococcus mutans UA159 |
47.91 |
76.885 |
0.368 |
| clpE | Streptococcus pneumoniae Rx1 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.13 |
79.852 |
0.368 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.613 |
81.459 |
0.363 |