Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FOC54_RS08855 | Genome accession | NZ_CP046306 |
| Coordinates | 1737256..1737651 (+) | Length | 131 a.a. |
| NCBI ID | WP_002448700.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain FDAARGOS_746 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1732256..1742651
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC54_RS08825 (FOC54_08825) | atpD | 1732361..1733773 (+) | 1413 | WP_017175135.1 | F0F1 ATP synthase subunit beta | - |
| FOC54_RS08830 (FOC54_08830) | - | 1733795..1734196 (+) | 402 | WP_002448708.1 | F0F1 ATP synthase subunit epsilon | - |
| FOC54_RS08835 (FOC54_08835) | - | 1734505..1734735 (+) | 231 | WP_002448711.1 | DUF1146 family protein | - |
| FOC54_RS08840 (FOC54_08840) | murA | 1734842..1736107 (+) | 1266 | WP_155975495.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FOC54_RS08845 (FOC54_08845) | fabZ | 1736135..1736572 (+) | 438 | WP_002448673.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FOC54_RS08850 (FOC54_08850) | - | 1736622..1737062 (-) | 441 | WP_087436801.1 | YwpF-like family protein | - |
| FOC54_RS08855 (FOC54_08855) | ssb | 1737256..1737651 (+) | 396 | WP_002448700.1 | single-stranded DNA-binding protein | Machinery gene |
| FOC54_RS08860 (FOC54_08860) | - | 1738056..1738802 (+) | 747 | WP_087436803.1 | transglycosylase family protein | - |
| FOC54_RS08865 (FOC54_08865) | tenA | 1739195..1739884 (+) | 690 | WP_019835613.1 | thiaminase II | - |
| FOC54_RS08870 (FOC54_08870) | thiD | 1739877..1740698 (+) | 822 | WP_002455065.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FOC54_RS08875 (FOC54_08875) | thiM | 1740691..1741479 (+) | 789 | WP_155975496.1 | hydroxyethylthiazole kinase | - |
| FOC54_RS08880 (FOC54_08880) | thiE | 1741482..1742120 (+) | 639 | WP_048787784.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15163.35 Da Isoelectric Point: 7.1326
>NTDB_id=402479 FOC54_RS08855 WP_002448700.1 1737256..1737651(+) (ssb) [Staphylococcus hominis strain FDAARGOS_746]
MLNKIVIVGRMTKDAKIYNNEEVKIATFSVATERNYKDENDEIACDYILCKAFGKMASNIEKYTSQGSLVGITGQMRSRK
YEKEKQTHFVTELYVETIKFMSPKLNNEKLSDNSLNTDTYPFDHLELMNIK
MLNKIVIVGRMTKDAKIYNNEEVKIATFSVATERNYKDENDEIACDYILCKAFGKMASNIEKYTSQGSLVGITGQMRSRK
YEKEKQTHFVTELYVETIKFMSPKLNNEKLSDNSLNTDTYPFDHLELMNIK
Nucleotide
Download Length: 396 bp
>NTDB_id=402479 FOC54_RS08855 WP_002448700.1 1737256..1737651(+) (ssb) [Staphylococcus hominis strain FDAARGOS_746]
ATGTTAAATAAGATAGTAATCGTTGGTCGTATGACTAAAGATGCAAAAATTTATAATAATGAGGAGGTGAAAATCGCAAC
GTTTAGTGTGGCTACTGAACGTAATTATAAAGATGAAAATGATGAAATAGCGTGTGACTACATATTGTGTAAAGCATTTG
GTAAGATGGCCAGTAACATTGAAAAATATACTTCTCAAGGATCATTAGTAGGTATTACTGGCCAAATGCGTTCTCGTAAA
TATGAAAAGGAAAAACAAACTCACTTTGTAACAGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATTAAATAA
TGAAAAACTCTCAGATAACTCACTAAATACAGACACTTATCCATTTGATCATCTCGAATTAATGAATATAAAATAA
ATGTTAAATAAGATAGTAATCGTTGGTCGTATGACTAAAGATGCAAAAATTTATAATAATGAGGAGGTGAAAATCGCAAC
GTTTAGTGTGGCTACTGAACGTAATTATAAAGATGAAAATGATGAAATAGCGTGTGACTACATATTGTGTAAAGCATTTG
GTAAGATGGCCAGTAACATTGAAAAATATACTTCTCAAGGATCATTAGTAGGTATTACTGGCCAAATGCGTTCTCGTAAA
TATGAAAAGGAAAAACAAACTCACTTTGTAACAGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATTAAATAA
TGAAAAACTCTCAGATAACTCACTAAATACAGACACTTATCCATTTGATCATCTCGAATTAATGAATATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
73.282 |
100 |
0.733 |
| ssb | Staphylococcus aureus MW2 |
72.519 |
100 |
0.725 |