Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FOC55_RS09700 | Genome accession | NZ_CP046301 |
| Coordinates | 1976154..1976549 (+) | Length | 131 a.a. |
| NCBI ID | WP_002448700.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain FDAARGOS_747 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1971154..1981549
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC55_RS09670 (FOC55_09675) | atpD | 1971259..1972671 (+) | 1413 | WP_002448706.1 | F0F1 ATP synthase subunit beta | - |
| FOC55_RS09675 (FOC55_09680) | - | 1972693..1973094 (+) | 402 | WP_002448708.1 | F0F1 ATP synthase subunit epsilon | - |
| FOC55_RS09680 (FOC55_09685) | - | 1973403..1973633 (+) | 231 | WP_002448711.1 | DUF1146 family protein | - |
| FOC55_RS09685 (FOC55_09690) | murA | 1973740..1975005 (+) | 1266 | WP_002448704.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FOC55_RS09690 (FOC55_09695) | fabZ | 1975033..1975470 (+) | 438 | WP_002448673.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FOC55_RS09695 (FOC55_09700) | - | 1975520..1975960 (-) | 441 | WP_002448687.1 | YwpF-like family protein | - |
| FOC55_RS09700 (FOC55_09705) | ssb | 1976154..1976549 (+) | 396 | WP_002448700.1 | single-stranded DNA-binding protein | Machinery gene |
| FOC55_RS09705 (FOC55_09710) | - | 1976954..1977700 (+) | 747 | WP_002448645.1 | transglycosylase family protein | - |
| FOC55_RS09710 (FOC55_09715) | tenA | 1978091..1978780 (+) | 690 | WP_002455064.1 | thiaminase II | - |
| FOC55_RS09715 (FOC55_09720) | thiD | 1978773..1979594 (+) | 822 | WP_002455065.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FOC55_RS09720 (FOC55_09725) | thiM | 1979587..1980375 (+) | 789 | WP_002448660.1 | hydroxyethylthiazole kinase | - |
| FOC55_RS09725 (FOC55_09730) | thiE | 1980378..1981016 (+) | 639 | WP_002448695.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15163.35 Da Isoelectric Point: 7.1326
>NTDB_id=402456 FOC55_RS09700 WP_002448700.1 1976154..1976549(+) (ssb) [Staphylococcus hominis strain FDAARGOS_747]
MLNKIVIVGRMTKDAKIYNNEEVKIATFSVATERNYKDENDEIACDYILCKAFGKMASNIEKYTSQGSLVGITGQMRSRK
YEKEKQTHFVTELYVETIKFMSPKLNNEKLSDNSLNTDTYPFDHLELMNIK
MLNKIVIVGRMTKDAKIYNNEEVKIATFSVATERNYKDENDEIACDYILCKAFGKMASNIEKYTSQGSLVGITGQMRSRK
YEKEKQTHFVTELYVETIKFMSPKLNNEKLSDNSLNTDTYPFDHLELMNIK
Nucleotide
Download Length: 396 bp
>NTDB_id=402456 FOC55_RS09700 WP_002448700.1 1976154..1976549(+) (ssb) [Staphylococcus hominis strain FDAARGOS_747]
ATGTTAAATAAGATAGTAATCGTTGGTCGTATGACTAAAGATGCAAAAATTTATAATAATGAGGAGGTGAAAATCGCAAC
GTTTAGTGTGGCTACTGAACGTAATTATAAAGATGAAAATGATGAAATAGCGTGTGACTATATATTGTGTAAAGCATTTG
GTAAGATGGCCAGTAACATTGAAAAATATACTTCTCAAGGATCATTAGTAGGTATTACTGGCCAAATGCGTTCTCGTAAA
TATGAAAAGGAAAAACAAACTCACTTTGTAACAGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATTAAATAA
TGAAAAACTCTCAGATAACTCACTAAATACAGACACTTATCCATTTGATCATCTCGAATTAATGAATATAAAATAA
ATGTTAAATAAGATAGTAATCGTTGGTCGTATGACTAAAGATGCAAAAATTTATAATAATGAGGAGGTGAAAATCGCAAC
GTTTAGTGTGGCTACTGAACGTAATTATAAAGATGAAAATGATGAAATAGCGTGTGACTATATATTGTGTAAAGCATTTG
GTAAGATGGCCAGTAACATTGAAAAATATACTTCTCAAGGATCATTAGTAGGTATTACTGGCCAAATGCGTTCTCGTAAA
TATGAAAAGGAAAAACAAACTCACTTTGTAACAGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATTAAATAA
TGAAAAACTCTCAGATAACTCACTAAATACAGACACTTATCCATTTGATCATCTCGAATTAATGAATATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
73.282 |
100 |
0.733 |
| ssb | Staphylococcus aureus MW2 |
72.519 |
100 |
0.725 |