Detailed information NTG0402456

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HUZ77_RS01240
• Genome accession: NZ_CP055019
• Coordinates: 263845..264828 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196444.1
• Uniprot ID: -
• Organism: Escherichia coli strain SWHEFF_69
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 258845..269828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUZ77_RS01225 (HUZ77_01210)	dppA	260145..261752 (+)	1608	WP_061093023.1	dipeptide ABC transporter substrate-binding protein DppA	-
HUZ77_RS01230 (HUZ77_01215)	dppB	261903..262922 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HUZ77_RS01235 (HUZ77_01220)	dppC	262932..263834 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HUZ77_RS01240 (HUZ77_01225)	amiE	263845..264828 (+)	984	WP_001196444.1	dipeptide ABC transporter ATP-binding protein	Regulator
HUZ77_RS01245 (HUZ77_01230)	dppF	264825..265829 (+)	1005	WP_000103576.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HUZ77_RS01250 (HUZ77_01235)	yhjV	265859..267130 (-)	1272	WP_061093024.1	aromatic amino acid transport family protein	-
HUZ77_RS01255 (HUZ77_01240)	ldrD	267606..267713 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HUZ77_RS01260 (HUZ77_01245)	-	268089..268196 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35830.37 Da
• Isoelectric Point: 6.5813

>NTDB_id=402456 HUZ77_RS01240 WP_001196444.1 263845..264828(+) (amiE) [Escherichia coli strain SWHEFF_69]
MALLNIDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=402456 HUZ77_RS01240 WP_001196444.1 263845..264828(+) (amiE) [Escherichia coli strain SWHEFF_69]
ATGGCGTTATTAAATATAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCCCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTACGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401