Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   FOC55_RS07305 Genome accession   NZ_CP046301
Coordinates   1499524..1500420 (+) Length   298 a.a.
NCBI ID   WP_064206740.1    Uniprot ID   -
Organism   Staphylococcus hominis strain FDAARGOS_747     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1494524..1505420
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC55_RS07285 (FOC55_07290) - 1495179..1496039 (+) 861 WP_155968049.1 hypothetical protein -
  FOC55_RS07290 (FOC55_07295) - 1496074..1496367 (+) 294 WP_231115697.1 hypothetical protein -
  FOC55_RS07295 (FOC55_07300) - 1496476..1497951 (-) 1476 WP_064207306.1 alkaline phosphatase -
  FOC55_RS11220 - 1498332..1498505 (+) 174 WP_175936825.1 hypothetical protein -
  FOC55_RS11225 - 1498673..1498840 (+) 168 WP_167805834.1 hypothetical protein -
  FOC55_RS07300 (FOC55_07305) braR 1498853..1499518 (+) 666 WP_002454771.1 response regulator transcription factor Regulator
  FOC55_RS07305 (FOC55_07310) braS 1499524..1500420 (+) 897 WP_064206740.1 sensor histidine kinase Regulator
  FOC55_RS07310 (FOC55_07315) - 1500552..1501301 (+) 750 WP_064206741.1 ABC transporter ATP-binding protein -
  FOC55_RS07315 (FOC55_07320) - 1501303..1503258 (+) 1956 WP_049431959.1 FtsX-like permease family protein -
  FOC55_RS07320 (FOC55_07325) - 1503350..1504114 (+) 765 WP_049431956.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34633.25 Da        Isoelectric Point: 6.7773

>NTDB_id=402452 FOC55_RS07305 WP_064206740.1 1499524..1500420(+) (braS) [Staphylococcus hominis strain FDAARGOS_747]
MLKAFIKSIRHQMMIVALFLLLFLVIFFLFNLPFNAFFLGMAIILFIMIIFWLIQLSGFQEAVSLKEEVADLEDELQRVK
NEQAAYQVNVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVTINNL
VKPLIMKYSIQFIDQKTTIHYTRCEDEVLTDVQWCTIMIEQILNNALKYARGKDIWITFNNENHVLSIRDNGVGISKADL
PKIFDKGYSGYNGRLHQHSSGIGLFIVKHISAHLHHKVEVSSTLHEGTTFDIHFPENN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=402452 FOC55_RS07305 WP_064206740.1 1499524..1500420(+) (braS) [Staphylococcus hominis strain FDAARGOS_747]
ATGTTAAAAGCATTTATAAAATCGATACGTCATCAAATGATGATAGTAGCTTTATTTCTATTACTTTTCTTGGTGATTTT
CTTTCTTTTTAATTTGCCTTTTAATGCATTCTTTCTAGGTATGGCAATTATTCTTTTCATAATGATTATTTTTTGGTTGA
TTCAACTTAGTGGATTTCAAGAAGCAGTGTCTTTAAAAGAAGAAGTTGCTGACTTAGAAGATGAATTACAACGTGTAAAA
AATGAACAAGCTGCATACCAAGTCAATGTTGAGAACTATTTTTTAACATGGGTGCATCAAATGAAGACACCTATTACCGC
TTCAAAACTCCTTCTAGAAAGAAATGAAGATAATGTAGTAAATCGTGTGCGTCAAGAAATTATACAAATTGATAACTATA
CGAGTCTTGCACTCAGCTATTTAAAATTGATGAATCAAGAAACGGATATGTCCTTTTCAAAAGTGACCATTAACAATCTC
GTTAAACCGCTTATTATGAAATATTCGATTCAATTCATCGATCAAAAAACAACTATTCATTACACACGTTGTGAAGATGA
AGTACTGACTGATGTTCAATGGTGTACGATCATGATAGAACAAATTCTTAATAATGCTTTGAAATATGCAAGAGGTAAAG
ATATTTGGATTACGTTTAACAACGAAAATCATGTGCTATCTATACGAGATAACGGTGTAGGAATTAGTAAAGCCGATCTT
CCCAAAATTTTCGATAAAGGGTACTCAGGCTATAACGGAAGACTTCATCAACATTCAAGTGGCATCGGATTATTTATTGT
TAAACATATATCGGCACATTTACATCATAAAGTAGAAGTATCTTCAACGCTCCATGAAGGAACTACATTTGACATACATT
TCCCAGAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(195-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60.068

98.322

0.591

Multiple sequence alignment