Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   FOC55_RS07300 Genome accession   NZ_CP046301
Coordinates   1498853..1499518 (+) Length   221 a.a.
NCBI ID   WP_002454771.1    Uniprot ID   -
Organism   Staphylococcus hominis strain FDAARGOS_747     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1493853..1504518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC55_RS07275 (FOC55_07280) - 1494170..1494271 (+) 102 WP_017175470.1 SE2200 family small protein -
  FOC55_RS07280 (FOC55_07285) - 1494502..1495146 (+) 645 WP_175936815.1 YveK family protein -
  FOC55_RS07285 (FOC55_07290) - 1495179..1496039 (+) 861 WP_155968049.1 hypothetical protein -
  FOC55_RS07290 (FOC55_07295) - 1496074..1496367 (+) 294 WP_231115697.1 hypothetical protein -
  FOC55_RS07295 (FOC55_07300) - 1496476..1497951 (-) 1476 WP_064207306.1 alkaline phosphatase -
  FOC55_RS11220 - 1498332..1498505 (+) 174 WP_175936825.1 hypothetical protein -
  FOC55_RS11225 - 1498673..1498840 (+) 168 WP_167805834.1 hypothetical protein -
  FOC55_RS07300 (FOC55_07305) braR 1498853..1499518 (+) 666 WP_002454771.1 response regulator transcription factor Regulator
  FOC55_RS07305 (FOC55_07310) braS 1499524..1500420 (+) 897 WP_064206740.1 sensor histidine kinase Regulator
  FOC55_RS07310 (FOC55_07315) - 1500552..1501301 (+) 750 WP_064206741.1 ABC transporter ATP-binding protein -
  FOC55_RS07315 (FOC55_07320) - 1501303..1503258 (+) 1956 WP_049431959.1 FtsX-like permease family protein -
  FOC55_RS07320 (FOC55_07325) - 1503350..1504114 (+) 765 WP_049431956.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25456.21 Da        Isoelectric Point: 4.5773

>NTDB_id=402451 FOC55_RS07300 WP_002454771.1 1498853..1499518(+) (braR) [Staphylococcus hominis strain FDAARGOS_747]
MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFDNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEMTVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=402451 FOC55_RS07300 WP_002454771.1 1498853..1499518(+) (braR) [Staphylococcus hominis strain FDAARGOS_747]
ATGAAAGTATTGATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGGAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTGCTAAGCAGTTTGATAATATTCTTGAAGAATTTAAAACTGCAGAACCTGAACTTGTGTTATTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGCTACGTAGAACATATGATTTAACGGTCTCAAATAATGAGATGACTGTTAAAGGGTGTA
AACTCGTTGTTGATGAAGCCACACTATACTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATTTTGAAT
AAATTATTTCAAAATGAAGGGAAATATGTCAATCGTACAGCAATTATTGAAAAATGTTGGGAATCAGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGTCTACGTAAAAAACTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGATATAAGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

100

0.774

Multiple sequence alignment