Detailed information NTG0402178

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: Vspart_RS18725
• Genome accession: NZ_CP046269
• Coordinates: 477178..479760 (+)
• Length: 860 a.a.
• NCBI ID: WP_182289089.1
• Uniprot ID: -
• Organism: Vibrio spartinae strain 3.6
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 472178..484760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Vspart_RS18695 (Vspart_03866)	-	472774..473187 (+)	414	WP_074371200.1	NUDIX hydrolase	-
Vspart_RS18700 (Vspart_03867)	-	473280..473753 (-)	474	WP_074371104.1	peroxiredoxin	-
Vspart_RS18705 (Vspart_03869)	-	474025..474342 (-)	318	WP_074371103.1	DUF496 family protein	-
Vspart_RS18710 (Vspart_03871)	-	474823..475473 (+)	651	WP_074371101.1	YceH family protein	-
Vspart_RS18715 (Vspart_03872)	-	475480..475779 (+)	300	WP_182289088.1	GIY-YIG nuclease family protein	-
Vspart_RS18720 (Vspart_03874)	luxP	476037..477137 (+)	1101	WP_370738654.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
Vspart_RS18725 (Vspart_03875)	luxQ	477178..479760 (+)	2583	WP_182289089.1	LuxQ periplasmic sensor domain-containing protein	Regulator
Vspart_RS18730 (Vspart_03876)	-	479844..480371 (-)	528	WP_228449085.1	hypothetical protein	-
Vspart_RS18735 (Vspart_03877)	-	480548..482023 (+)	1476	WP_182289090.1	cobyric acid synthase	-
Vspart_RS18740 (Vspart_03878)	-	482090..482416 (-)	327	WP_074371095.1	hypothetical protein	-
Vspart_RS18745 (Vspart_03879)	-	482523..482735 (-)	213	WP_074371094.1	hypothetical protein	-

Sequence

Protein

• Length: 860 a.a.
• Molecular weight: 97008.58 Da
• Isoelectric Point: 5.9109

>NTDB_id=402178 Vspart_RS18725 WP_182289089.1 477178..479760(+) (luxQ) [Vibrio spartinae strain 3.6]
MNVRPSPIHQKQKIATYFTRAITIIIVILTFSVLFQNYQISSQLIAQEVQRTANQTSGLVQGMVNFRLSLLKIHQDGSAK
NADLLHAVSSGKSQYIDQYFRAVDQLDPDNTPDVRFIAGLNHMLWDDGNAQFYGIVPNELESVSHRIAVNSEWMLVKIPS
LLETVYGLARRTPLVSNSGELIGYLYVMFVINNNYNLIEQIRSRSNSQNLILAIGSNVLSTTLNGEESYSEQDVLVNPQH
SDRLESYTVNTTELNVDDKPTQLMMYAVQDNQNVVKLKRNFYYGVVFILVATVLFSFILWRWLHKRIRAEIEKLVQFSRS
IVDRGAEHVFHGSKIEEFDLFGRALEHTFKRLSEQEKQFENLFNFSIAPTILWGADGRLLRMNPAAVKQFSKENQVSTFY
ELKERLIPSIKKASSGETLNEVATEFEGQIFRWTISPIVSEGHVESVLTQGQDVTTIAEAEKQSHLARSEAERAAGARAG
FLARMSHEVRTPLNGILGVSQLLKESVTDDKQREQVGVLSLCSEHLLAVLNDILDFSKIEQNKFKLNPVHFHLIEMVRVI
ERIYQPLCQEKGLELDVMTNIQKDTIVVIDQIRLNQITFNLLNNAIKFTREGEICVLINLNHSEEGAMFHVSISDTGIGI
GHDDLSLIFEPFIQGGTASNGEFGGSGLGLSIVKNLVELMGGVVSVSSQVGKGSSFEFTIPIEVEQYHAKKVKETIDQVP
SGQLFEQSPHVLLVEDNKTNAYIAKAFCERFGLRVTWVEDGTVAVETLKKMGFDLILMDNQLPGMDGVEVTDFVKHQLRL
DTPIYACTADDTEKTKNDFLHAGAEYILVKPIREENLYKALVHFRDNHWTPQTSKALQSH

Nucleotide

• Length: 2583 bp

>NTDB_id=402178 Vspart_RS18725 WP_182289089.1 477178..479760(+) (luxQ) [Vibrio spartinae strain 3.6]
ATGAATGTCAGACCGAGCCCTATTCATCAGAAACAGAAGATAGCGACCTACTTTACTCGGGCAATTACAATTATTATTGT
CATTCTGACCTTTAGTGTCCTGTTTCAAAACTATCAGATCAGTAGTCAGTTGATCGCTCAGGAAGTGCAGCGAACGGCAA
ATCAGACTTCAGGATTAGTGCAGGGCATGGTCAATTTCCGTCTGTCTTTACTCAAAATCCATCAAGATGGTAGTGCGAAA
AATGCTGATTTATTACATGCGGTAAGTTCTGGGAAATCGCAATATATTGATCAATATTTCCGTGCCGTTGACCAGCTTGA
CCCGGATAATACCCCGGATGTCCGTTTTATTGCTGGGTTGAATCATATGCTGTGGGATGACGGGAACGCTCAGTTCTATG
GCATTGTGCCGAATGAATTGGAATCTGTTTCACACCGGATTGCAGTGAACAGTGAATGGATGTTGGTGAAAATACCGTCT
TTACTGGAGACCGTTTATGGTTTGGCAAGAAGAACGCCGCTGGTGAGTAATTCTGGTGAATTGATCGGTTACTTATACGT
CATGTTTGTGATTAATAATAATTACAATCTTATCGAACAAATTCGCTCCCGCAGTAATTCGCAGAATTTGATCTTAGCGA
TCGGGTCCAATGTGCTTTCGACGACGCTCAACGGAGAAGAGTCATACTCAGAGCAGGATGTGCTTGTTAACCCCCAACAT
TCTGATCGGCTTGAGTCTTATACGGTCAACACGACTGAGCTGAATGTTGATGATAAACCGACACAGCTGATGATGTATGC
CGTTCAGGATAATCAGAATGTGGTCAAACTGAAGCGTAATTTTTATTATGGTGTGGTGTTTATTCTCGTGGCGACCGTAT
TGTTCTCTTTCATCTTGTGGCGATGGTTACATAAGCGCATTCGTGCTGAGATTGAAAAACTGGTGCAGTTTAGTCGCTCA
ATTGTGGACCGTGGGGCCGAGCATGTTTTTCATGGTTCAAAGATCGAGGAGTTTGACCTATTCGGGCGAGCACTTGAACA
TACCTTTAAGCGTTTATCTGAACAAGAAAAGCAATTTGAGAATCTGTTCAACTTCTCTATTGCTCCAACCATTTTATGGG
GCGCAGATGGCCGTTTACTACGGATGAATCCGGCCGCGGTGAAACAGTTTTCAAAAGAGAATCAAGTCTCTACGTTCTAT
GAACTAAAAGAACGATTAATTCCGAGTATCAAAAAGGCATCCAGCGGAGAGACGCTGAACGAAGTTGCGACTGAGTTTGA
AGGTCAAATATTCCGCTGGACGATTTCACCAATAGTGAGCGAAGGCCATGTTGAGTCGGTCCTGACTCAAGGGCAGGATG
TCACAACCATCGCTGAAGCTGAGAAGCAAAGCCATTTGGCGCGCAGTGAAGCAGAAAGAGCTGCTGGTGCGAGAGCCGGT
TTTCTGGCCCGGATGAGTCATGAGGTCAGAACACCTTTAAATGGGATTTTGGGTGTTTCACAATTATTGAAAGAGAGTGT
GACGGATGACAAGCAGCGTGAACAGGTTGGTGTGCTCAGTTTATGTAGCGAACATCTGCTTGCGGTTTTGAATGATATTC
TGGATTTCTCCAAGATTGAGCAAAATAAGTTCAAACTGAATCCGGTTCATTTCCACTTGATTGAGATGGTTCGAGTCATC
GAGCGGATTTATCAGCCGTTATGTCAGGAAAAGGGACTAGAACTCGATGTCATGACCAATATTCAGAAAGATACCATCGT
GGTGATTGATCAAATCCGTCTGAATCAAATCACCTTTAATCTACTGAATAACGCCATTAAATTTACCCGTGAAGGTGAGA
TTTGTGTACTGATCAATTTAAACCATTCAGAAGAAGGGGCAATGTTTCATGTCTCCATCTCTGATACCGGTATTGGCATT
GGACATGATGACCTTTCGTTGATCTTTGAACCCTTTATTCAAGGCGGTACGGCATCGAACGGCGAATTTGGCGGGAGTGG
TTTAGGGCTATCGATTGTGAAAAATCTGGTGGAACTCATGGGAGGCGTCGTATCGGTCTCATCTCAGGTTGGTAAAGGAA
GCAGCTTCGAGTTCACGATCCCGATTGAGGTTGAGCAATACCATGCTAAAAAAGTGAAAGAGACGATTGATCAGGTGCCG
TCTGGTCAGTTGTTCGAGCAATCTCCTCATGTACTATTAGTTGAAGACAATAAGACCAATGCCTATATTGCGAAGGCATT
CTGTGAGCGTTTTGGCTTGCGGGTGACATGGGTTGAAGATGGAACGGTTGCGGTGGAAACGCTTAAAAAAATGGGCTTTG
ATTTAATTTTGATGGATAACCAGTTGCCGGGAATGGATGGGGTTGAAGTCACCGATTTTGTGAAACATCAACTCAGGCTA
GATACCCCCATTTATGCATGTACTGCGGATGATACTGAAAAAACGAAAAATGATTTCTTACATGCAGGAGCAGAGTACAT
TCTGGTTAAACCCATTCGGGAAGAGAACTTATATAAGGCGCTGGTTCATTTCAGAGATAACCATTGGACGCCGCAGACAT
CGAAAGCGCTACAATCACATTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (590-703)

• His Kinase A (phospho-acceptor) domain (HisKA) (479-541)

• Response regulator receiver domain (Response_reg) (731-841)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	51.348	99.186	0.509