Detailed information
Bioinformatically predicted
Overview
| Name | hapR | Type | Regulator |
| Locus tag | Vspart_RS02770 | Genome accession | NZ_CP046268 |
| Coordinates | 606647..607267 (-) | Length | 206 a.a. |
| NCBI ID | WP_074372766.1 | Uniprot ID | A0A1N6M471 |
| Organism | Vibrio spartinae strain 3.6 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 601647..612267
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Vspart_RS02760 (Vspart_00560) | aceF | 602982..604853 (+) | 1872 | WP_182288165.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| Vspart_RS02765 (Vspart_00561) | lpdA | 605098..606522 (+) | 1425 | WP_074372765.1 | dihydrolipoyl dehydrogenase | - |
| Vspart_RS02770 (Vspart_00562) | hapR | 606647..607267 (-) | 621 | WP_074372766.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| Vspart_RS02775 (Vspart_00563) | hpt | 607691..608224 (+) | 534 | WP_074372767.1 | hypoxanthine phosphoribosyltransferase | - |
| Vspart_RS02780 (Vspart_00564) | can | 608373..609041 (-) | 669 | WP_074372768.1 | carbonate dehydratase | - |
| Vspart_RS02785 (Vspart_00565) | - | 609462..610439 (+) | 978 | WP_074372769.1 | ABC transporter ATP-binding protein | - |
| Vspart_RS02790 (Vspart_00566) | - | 610453..611223 (+) | 771 | WP_074372770.1 | ABC transporter permease | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 24089.51 Da Isoelectric Point: 6.4062
>NTDB_id=402154 Vspart_RS02770 WP_074372766.1 606647..607267(-) (hapR) [Vibrio spartinae strain 3.6]
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVHQFSNFL
ADNIDVDSYIKDNLYHLTHKMTKLVFEDCHWLKVWFEWSASTRDEVWPLFVSTNHTNRLLVKNMFVNAIERGDVSDHYDP
EHLVTLFLGIFYSLFVQVNRLQDQKEIDALVNSYLDMLCIYNNRRA
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVHQFSNFL
ADNIDVDSYIKDNLYHLTHKMTKLVFEDCHWLKVWFEWSASTRDEVWPLFVSTNHTNRLLVKNMFVNAIERGDVSDHYDP
EHLVTLFLGIFYSLFVQVNRLQDQKEIDALVNSYLDMLCIYNNRRA
Nucleotide
Download Length: 621 bp
>NTDB_id=402154 Vspart_RS02770 WP_074372766.1 606647..607267(-) (hapR) [Vibrio spartinae strain 3.6]
ATGGACGCTTCAATAGAAAAACGCCCTCGTACACGATTATCACCTCAGAAACGTAAACTTCAGTTGATGGAAATTGCGCT
TGAAGTCTTCGCTAAACGAGGTATCGGACGTGGTGGACATGCAGATATCGCTGAAATTGCTCAGGTTTCTGTCGCAACAG
TATTTAACTATTTCCCAACTCGTGAGGATTTAGTTGATGATGTTCTCACTCATGTCGTTCACCAATTCTCAAACTTCCTC
GCAGACAATATCGATGTCGATAGTTATATCAAAGATAATCTCTATCATCTCACCCATAAAATGACAAAGCTGGTCTTTGA
AGATTGTCATTGGCTGAAAGTGTGGTTTGAATGGAGTGCATCGACTCGCGACGAAGTCTGGCCGTTGTTCGTATCGACTA
ACCATACCAACCGCCTGTTGGTAAAAAATATGTTTGTCAACGCAATCGAACGCGGCGATGTCAGCGATCATTATGATCCT
GAACATTTAGTCACGCTGTTCCTCGGAATTTTCTATTCCCTGTTTGTGCAAGTGAACCGTTTACAAGATCAAAAAGAGAT
CGATGCTCTCGTAAACAGCTACTTGGACATGTTATGCATTTATAACAACCGTCGGGCTTAA
ATGGACGCTTCAATAGAAAAACGCCCTCGTACACGATTATCACCTCAGAAACGTAAACTTCAGTTGATGGAAATTGCGCT
TGAAGTCTTCGCTAAACGAGGTATCGGACGTGGTGGACATGCAGATATCGCTGAAATTGCTCAGGTTTCTGTCGCAACAG
TATTTAACTATTTCCCAACTCGTGAGGATTTAGTTGATGATGTTCTCACTCATGTCGTTCACCAATTCTCAAACTTCCTC
GCAGACAATATCGATGTCGATAGTTATATCAAAGATAATCTCTATCATCTCACCCATAAAATGACAAAGCTGGTCTTTGA
AGATTGTCATTGGCTGAAAGTGTGGTTTGAATGGAGTGCATCGACTCGCGACGAAGTCTGGCCGTTGTTCGTATCGACTA
ACCATACCAACCGCCTGTTGGTAAAAAATATGTTTGTCAACGCAATCGAACGCGGCGATGTCAGCGATCATTATGATCCT
GAACATTTAGTCACGCTGTTCCTCGGAATTTTCTATTCCCTGTTTGTGCAAGTGAACCGTTTACAAGATCAAAAAGAGAT
CGATGCTCTCGTAAACAGCTACTTGGACATGTTATGCATTTATAACAACCGTCGGGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hapR | Vibrio cholerae C6706 |
73.892 |
98.544 |
0.728 |
| hapR | Vibrio cholerae strain A1552 |
73.892 |
98.544 |
0.728 |
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
75.377 |
96.602 |
0.728 |