Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   GKC25_RS14185 Genome accession   NZ_CP046128
Coordinates   2766610..2768922 (-) Length   770 a.a.
NCBI ID   WP_095285837.1    Uniprot ID   A0AAE4B9F5
Organism   Bacillus pumilus strain V17C11     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2761610..2773922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GKC25_RS14145 (GKC25_14000) - 2762000..2762431 (+) 432 WP_034317176.1 Na(+)/H(+) antiporter subunit B -
  GKC25_RS14150 (GKC25_14005) - 2762431..2762772 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  GKC25_RS14155 (GKC25_14010) - 2762765..2764243 (+) 1479 WP_034659818.1 Na+/H+ antiporter subunit D -
  GKC25_RS14160 (GKC25_14015) - 2764250..2764729 (+) 480 WP_034659819.1 Na+/H+ antiporter subunit E -
  GKC25_RS14165 (GKC25_14020) - 2764729..2765010 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  GKC25_RS14170 (GKC25_14025) mnhG 2764994..2765368 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  GKC25_RS14175 (GKC25_14030) - 2765475..2765864 (-) 390 WP_034659822.1 hotdog fold thioesterase -
  GKC25_RS14180 (GKC25_14035) comA 2765888..2766529 (-) 642 WP_058013793.1 response regulator transcription factor Regulator
  GKC25_RS14185 (GKC25_14040) comP 2766610..2768922 (-) 2313 WP_095285837.1 ATP-binding protein Regulator
  GKC25_RS14190 (GKC25_14045) comX 2768979..2769146 (-) 168 WP_081311380.1 competence pheromone ComX -
  GKC25_RS14195 (GKC25_14050) - 2769143..2770057 (-) 915 WP_034659828.1 polyprenyl synthetase family protein -
  GKC25_RS14200 (GKC25_14055) degQ 2770209..2770349 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  GKC25_RS14205 (GKC25_14060) - 2770855..2771208 (+) 354 WP_095285836.1 inner spore coat protein -
  GKC25_RS14210 (GKC25_14065) - 2771242..2772468 (-) 1227 WP_034659830.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89360.89 Da        Isoelectric Point: 7.8935

>NTDB_id=401399 GKC25_RS14185 WP_095285837.1 2766610..2768922(-) (comP) [Bacillus pumilus strain V17C11]
MKLTYTKLSTFLVFLSFLFVIYISYIYVFDIFNGARVEKNENGQTEVVDVEYLSLAYSSGLKEGDIILKINGQSNLIQDH
MINGKLRNVQRIDIQRGNQIISLKNKTLIGRESLFVYLIPLLLYSICLFCIFFIIKINKEPQRKSAFLLILFLLSICIGY
LSAGTSGIGDRFSHYVLLLCLSSVSILYIHFIYQYFKEFDVHLTNPKLIRYLYLIPIFNLAVHSGVSVSSELRKYVPSIS
LLFFFGTVLVALYLIVRGMKKYKKTAHGSVLKFFAIMNVLSFSPFILFFVIPYVFFDKYLIDPFILTSIVLLIPFSLVYQ
FMTNKLYNMDFLISRLRYYGFLAITPTIFVVVTFYILQKPEDLKYTLKLALITYALMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKPDGQIEEIDESSGDSNLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAMSKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQATQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=401399 GKC25_RS14185 WP_095285837.1 2766610..2768922(-) (comP) [Bacillus pumilus strain V17C11]
ATGAAGCTTACCTATACAAAATTGTCCACGTTTCTTGTATTTTTATCTTTTTTATTTGTGATCTATATTTCATATATCTA
TGTATTTGATATTTTTAATGGTGCACGTGTAGAAAAGAATGAAAACGGTCAAACGGAAGTTGTTGACGTTGAATATCTTT
CTTTAGCTTATTCGTCGGGGTTAAAAGAAGGAGATATTATACTAAAGATAAACGGACAATCTAATTTAATTCAAGACCAC
ATGATCAATGGTAAGCTTAGAAATGTACAAAGAATTGATATACAAAGAGGCAACCAAATCATATCACTTAAAAATAAGAC
GTTGATTGGTCGCGAAAGCTTATTTGTCTATTTAATCCCTCTTCTTCTATATTCAATATGCTTATTCTGTATCTTTTTTA
TTATTAAAATTAACAAAGAACCGCAACGAAAATCTGCATTTTTATTAATTTTATTCTTATTGTCAATTTGTATTGGGTAT
CTGAGTGCAGGTACGTCAGGAATTGGTGATAGATTTAGCCATTATGTTCTCTTATTGTGTTTATCAAGTGTGTCTATCTT
ATATATTCATTTTATCTATCAATATTTCAAGGAATTTGATGTGCATTTAACGAATCCAAAGCTCATCAGGTACTTATATT
TGATCCCTATTTTTAACCTTGCCGTACATAGCGGGGTTTCGGTGTCATCTGAATTGAGAAAATATGTTCCTAGTATCAGT
TTGCTGTTTTTTTTCGGAACAGTTTTAGTAGCTCTTTATTTAATAGTCAGAGGAATGAAGAAATATAAAAAAACAGCACA
TGGTTCAGTTTTAAAGTTTTTTGCCATTATGAATGTTTTGTCGTTCAGTCCATTCATTCTCTTTTTTGTTATTCCCTATG
TGTTTTTTGATAAGTATTTGATTGATCCTTTTATTCTGACATCAATCGTTTTGTTAATTCCTTTTTCTCTCGTCTACCAA
TTCATGACGAACAAACTTTACAATATGGATTTTTTGATTAGCAGACTGAGGTACTATGGCTTTCTAGCCATCACACCGAC
CATTTTTGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTGAAGTACACACTGAAGCTCGCATTAATCACCT
ACGCGCTCATGCTGGCTGTTTTCTATTTCAAAGAAATTCTAGATTTCCGTTTTCGTCTGAAGCGTTTTTCAGAGAAGCAT
AATTACCAGGACAGCGTGTTTAAATTTACGCAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTGCTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTTGTTGTTAATAAAGCCTTTGTGCTTGAAGTGAAGCCAGATGGACAGATTGAAGAGATTG
ATGAATCTTCAGGTGATAGCAATCTATGGAAAGAGTATGTGGATCAATTTCAGGATATTTTAGGGGAAGTCGGGAAAATC
ATTGAGCTTGATAAAGGGTTTATGATGAAAATTGGCGAGCGGGGCGGTCACTCGTTTATGATTTGCTGTTTATCCAATTT
ACAGACACCGAAATTGACGCGTGATGAGATTTCTTGGCTGAAAACATTGGCTTTTTATACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATCGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAATCCTGCTTGGCTGAAAAAAGTC
ATGTTTGCGATGGAAGAAAAACAGCGCTCCGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGATTTGATATCGCT
GAAAAGACAGTCAGAGATGTTTTTAACGAATTTCCAAAACGATCAATGCCCAACGTCTATTGAACAATCGCTTATCTCAT
GGAATGAACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTGCTGTACGATTTA
GGTTTAGTCAAGGCGATGTCGAAGCTGACTTCTCAAATTCAGGAGGAAGCACCGTTTCATATCCGGCTGAATACAACACG
CTTTGATAAAGAACTGGACATTGATATTGATTCACAGCTGAATATTTACCGAATTGTTCAGGAGCTGTTATCCAATGCCC
TGAAGCACTCCCAAGCCACTCAAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGAT
GGAGTCGGTTTTGATGCAAGCCATCTTGATCAGCACACCATGAGCATGGGCCTCTCGGGAATCAGAGAACGAGTCAAGGC
GTTAAATGGGAAGCTTCACATTCACACAGCCCCAGAAAAAGGACTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.161

100

0.495


Multiple sequence alignment