Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | GKC25_RS05310 | Genome accession | NZ_CP046128 |
| Coordinates | 1099648..1100610 (+) | Length | 320 a.a. |
| NCBI ID | WP_034663299.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain V17C11 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1094648..1105610
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GKC25_RS05280 (GKC25_05260) | argF | 1094975..1095925 (+) | 951 | WP_034663317.1 | ornithine carbamoyltransferase | - |
| GKC25_RS05285 (GKC25_05265) | - | 1096028..1096207 (+) | 180 | WP_034663316.1 | YjzC family protein | - |
| GKC25_RS05290 (GKC25_05270) | - | 1096376..1097641 (+) | 1266 | WP_034663308.1 | MFS transporter | - |
| GKC25_RS05295 (GKC25_05275) | - | 1097760..1097954 (-) | 195 | WP_003211779.1 | YjzD family protein | - |
| GKC25_RS05300 (GKC25_05280) | - | 1098166..1098906 (+) | 741 | WP_034663305.1 | hypothetical protein | - |
| GKC25_RS05305 (GKC25_05285) | - | 1098982..1099557 (+) | 576 | WP_034663302.1 | hypothetical protein | - |
| GKC25_RS05310 (GKC25_05290) | med | 1099648..1100610 (+) | 963 | WP_034663299.1 | BMP family ABC transporter substrate-binding protein | Regulator |
| GKC25_RS05315 (GKC25_05295) | comZ | 1100621..1100818 (+) | 198 | WP_003211983.1 | ComZ family protein | Regulator |
| GKC25_RS05320 (GKC25_05300) | - | 1100828..1101061 (-) | 234 | WP_034663296.1 | hypothetical protein | - |
| GKC25_RS05325 (GKC25_05305) | - | 1101231..1102169 (+) | 939 | WP_012009552.1 | beta-ketoacyl-ACP synthase III | - |
| GKC25_RS05330 (GKC25_05310) | fabF | 1102191..1103432 (+) | 1242 | WP_034663293.1 | beta-ketoacyl-ACP synthase II | - |
| GKC25_RS05335 (GKC25_05315) | - | 1103510..1104304 (+) | 795 | WP_034663290.1 | DUF2268 domain-containing protein | - |
| GKC25_RS05340 (GKC25_05320) | - | 1104473..1105453 (+) | 981 | WP_045210037.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 35693.57 Da Isoelectric Point: 5.2616
>NTDB_id=401367 GKC25_RS05310 WP_034663299.1 1099648..1100610(+) (med) [Bacillus pumilus strain V17C11]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK
Nucleotide
Download Length: 963 bp
>NTDB_id=401367 GKC25_RS05310 WP_034663299.1 1099648..1100610(+) (med) [Bacillus pumilus strain V17C11]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
64.537 |
97.813 |
0.631 |