Detailed information NTG0040111

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SPNINV200_RS11010
• Genome accession: NC_017593
• Coordinates: 2077287..2078384 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266651.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae INV200
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2072287..2083384

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPNINV200_RS10985 (SPNINV200_20310)	pgsA	2072808..2073353 (-)	546	WP_000712129.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SPNINV200_RS10990 (SPNINV200_20320)	rodZ	2073364..2074185 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
SPNINV200_RS10995 (SPNINV200_20330)	yfmH	2074227..2075510 (-)	1284	WP_000170191.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SPNINV200_RS11000 (SPNINV200_20340)	yfmF	2075507..2076757 (-)	1251	WP_000424272.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SPNINV200_RS11005 (SPNINV200_20350)	yaaA	2076916..2077284 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
SPNINV200_RS11010 (SPNINV200_20360)	recF	2077287..2078384 (+)	1098	WP_000266651.1	DNA replication/repair protein RecF	Machinery gene
SPNINV200_RS11015 (SPNINV200_20370)	guaB	2078435..2079913 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
SPNINV200_RS11020 (SPNINV200_20380)	trpS	2080065..2081090 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
SPNINV200_RS11025 (SPNINV200_20390)	-	2081296..2082918 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41871.94 Da
• Isoelectric Point: 8.6747

>NTDB_id=40111 SPNINV200_RS11010 WP_000266651.1 2077287..2078384(+) (recF) [Streptococcus pneumoniae INV200]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTQTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=40111 SPNINV200_RS11010 WP_000266651.1 2077287..2078384(+) (recF) [Streptococcus pneumoniae INV200]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCAAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAGGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46