Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   GKQ56_RS05660 Genome accession   NZ_CP046111
Coordinates   1167129..1168397 (+) Length   422 a.a.
NCBI ID   WP_002362168.1    Uniprot ID   -
Organism   Enterococcus faecalis strain 111540047-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1162129..1173397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GKQ56_RS05635 (GKQ56_05810) - 1163144..1163737 (+) 594 WP_002404121.1 response regulator transcription factor -
  GKQ56_RS05640 (GKQ56_05815) - 1163788..1164359 (-) 572 Protein_1087 CHAP domain-containing protein -
  GKQ56_RS14405 - 1164364..1164552 (-) 189 Protein_1088 ATP-binding protein -
  GKQ56_RS05650 (GKQ56_05830) - 1165247..1165849 (-) 603 WP_002393123.1 YitT family protein -
  GKQ56_RS05655 (GKQ56_05835) - 1165934..1166713 (-) 780 WP_002404124.1 SDR family oxidoreductase -
  GKQ56_RS05660 (GKQ56_05845) eeP 1167129..1168397 (+) 1269 WP_002362168.1 RIP metalloprotease RseP Regulator
  GKQ56_RS05665 (GKQ56_05850) - 1168469..1170187 (+) 1719 WP_002359769.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46486.46 Da        Isoelectric Point: 6.6651

>NTDB_id=401039 GKQ56_RS05660 WP_002362168.1 1167129..1168397(+) (eeP) [Enterococcus faecalis strain 111540047-1]
MKTIITFIIVFGILVLVHEFGHFYFAKRAGILVREFAIGMGPKIFAHRGKDGTTYTIRLLPIGGYVRMAGMGEDMTEITP
GMPLSVELNAVGNVVKINTSKKVQLPHSIPMEVVDFDLEKELFIKGYVNGNEEEETVYKVDHDATIIESDGTEVRIAPLD
VQFQSAKLSQRILTNFAGPMNNFILGFILFTLAVFLQGGVTDLNTNQIGQVIPNGPAAEAGLKENDKVLSINNQKIKKYE
DFTTIVQKNPEKPLTFVVERNGKEEQLTVTPEKQKVEKQTIGKVGVYPYMKTDLPSKLMGGIQDTLNSTTQIFKALGSLF
TGFSLNKLGGPVMMFKLSEEASNAGVSTVVFLMAMLSMNLGIINLLPIPALDGGKIVLNIIEGVRGKPISPEKEGIITLI
GFGFVMVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=401039 GKQ56_RS05660 WP_002362168.1 1167129..1168397(+) (eeP) [Enterococcus faecalis strain 111540047-1]
ATGAAAACAATTATCACATTCATTATTGTCTTCGGTATTCTTGTCCTCGTACATGAATTTGGCCACTTTTATTTTGCAAA
ACGAGCGGGTATTTTAGTTCGTGAGTTTGCAATCGGAATGGGACCAAAGATTTTTGCGCATCGTGGAAAAGATGGCACCA
CTTATACGATTCGCTTATTGCCGATTGGTGGCTATGTGCGAATGGCTGGGATGGGCGAAGACATGACAGAAATCACACCA
GGTATGCCTCTATCTGTTGAGTTAAATGCCGTGGGTAATGTGGTTAAAATTAATACAAGTAAAAAAGTACAATTACCTCA
TAGTATTCCGATGGAAGTCGTTGATTTTGATCTTGAAAAAGAATTATTCATCAAGGGCTATGTCAATGGAAACGAGGAAG
AAGAAACCGTTTATAAAGTTGACCATGATGCAACGATTATTGAAAGTGATGGAACCGAGGTGCGGATTGCGCCACTTGAC
GTTCAATTTCAATCAGCGAAATTATCGCAACGCATTTTGACGAACTTTGCGGGACCCATGAATAACTTTATCTTAGGGTT
TATTCTGTTTACGTTAGCGGTCTTTCTACAAGGAGGCGTTACTGATTTAAACACGAATCAAATTGGACAAGTGATTCCTA
ATGGCCCAGCCGCAGAAGCTGGGTTGAAAGAAAACGATAAAGTCTTATCGATTAATAATCAAAAAATCAAAAAATACGAA
GATTTTACAACCATTGTGCAGAAGAACCCCGAAAAGCCGTTAACGTTCGTAGTTGAGCGTAACGGCAAAGAAGAGCAACT
AACAGTGACACCAGAAAAACAAAAAGTGGAAAAACAAACGATTGGTAAAGTCGGCGTTTATCCTTATATGAAAACCGATT
TACCGTCAAAATTGATGGGCGGTATTCAGGATACTTTAAATAGTACGACACAGATTTTTAAAGCACTCGGCTCACTATTC
ACAGGCTTTAGTTTAAACAAACTAGGTGGGCCAGTCATGATGTTTAAGTTATCGGAAGAAGCATCCAATGCTGGAGTAAG
TACAGTTGTATTCTTAATGGCCATGTTGTCAATGAACTTAGGGATTATTAATTTGTTGCCGATCCCAGCTTTAGATGGCG
GGAAAATTGTCTTAAACATTATTGAAGGTGTACGTGGAAAACCAATTAGTCCTGAAAAAGAAGGCATCATTACGTTAATT
GGCTTTGGGTTTGTCATGGTGTTAATGGTGTTAGTTACTTGGAACGATATTCAACGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(208-260)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.738

100

0.545
  eeP Streptococcus thermophilus LMG 18311

53.738

100

0.545

Multiple sequence alignment