Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   GKQ57_RS05020 Genome accession   NZ_CP046108
Coordinates   1057866..1059134 (+) Length   422 a.a.
NCBI ID   WP_002362168.1    Uniprot ID   -
Organism   Enterococcus faecalis strain 133170041-3     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1052866..1064134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GKQ57_RS05000 (GKQ57_05175) - 1053943..1054902 (-) 960 WP_000221326.1 IS30-like element IS6770 family transposase -
  GKQ57_RS05005 (GKQ57_05180) - 1054960..1055598 (+) 639 WP_010785053.1 AIPR family protein -
  GKQ57_RS05010 (GKQ57_05190) - 1055983..1056585 (-) 603 WP_002389010.1 YitT family protein -
  GKQ57_RS05015 (GKQ57_05195) - 1056671..1057450 (-) 780 WP_002372136.1 SDR family oxidoreductase -
  GKQ57_RS05020 (GKQ57_05200) eeP 1057866..1059134 (+) 1269 WP_002362168.1 RIP metalloprotease RseP Regulator
  GKQ57_RS05025 (GKQ57_05205) - 1059206..1060924 (+) 1719 WP_002372134.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46486.46 Da        Isoelectric Point: 6.6651

>NTDB_id=401002 GKQ57_RS05020 WP_002362168.1 1057866..1059134(+) (eeP) [Enterococcus faecalis strain 133170041-3]
MKTIITFIIVFGILVLVHEFGHFYFAKRAGILVREFAIGMGPKIFAHRGKDGTTYTIRLLPIGGYVRMAGMGEDMTEITP
GMPLSVELNAVGNVVKINTSKKVQLPHSIPMEVVDFDLEKELFIKGYVNGNEEEETVYKVDHDATIIESDGTEVRIAPLD
VQFQSAKLSQRILTNFAGPMNNFILGFILFTLAVFLQGGVTDLNTNQIGQVIPNGPAAEAGLKENDKVLSINNQKIKKYE
DFTTIVQKNPEKPLTFVVERNGKEEQLTVTPEKQKVEKQTIGKVGVYPYMKTDLPSKLMGGIQDTLNSTTQIFKALGSLF
TGFSLNKLGGPVMMFKLSEEASNAGVSTVVFLMAMLSMNLGIINLLPIPALDGGKIVLNIIEGVRGKPISPEKEGIITLI
GFGFVMVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=401002 GKQ57_RS05020 WP_002362168.1 1057866..1059134(+) (eeP) [Enterococcus faecalis strain 133170041-3]
ATGAAAACAATTATCACATTCATTATTGTCTTCGGTATTCTTGTCCTCGTACATGAATTTGGCCACTTTTATTTTGCAAA
ACGAGCGGGTATTTTAGTTCGTGAGTTTGCAATCGGAATGGGACCAAAGATTTTTGCGCATCGTGGAAAAGATGGCACCA
CTTATACGATTCGCTTATTGCCAATTGGTGGCTATGTGCGAATGGCTGGGATGGGCGAAGACATGACAGAAATCACACCA
GGTATGCCTCTATCTGTTGAGTTAAATGCCGTGGGTAATGTGGTTAAAATTAATACAAGTAAAAAAGTACAATTACCTCA
TAGTATTCCGATGGAAGTCGTTGATTTTGATCTTGAAAAAGAATTATTCATCAAGGGCTATGTCAATGGAAACGAGGAAG
AAGAAACCGTTTATAAAGTTGACCATGATGCAACGATTATTGAAAGTGATGGAACCGAGGTGCGGATTGCGCCACTTGAC
GTTCAATTTCAATCAGCGAAATTATCGCAACGCATTTTGACGAACTTTGCGGGACCCATGAATAACTTTATCTTAGGGTT
TATTCTGTTTACGTTAGCGGTCTTTCTACAAGGAGGCGTTACTGATTTAAACACGAATCAAATTGGACAAGTGATTCCTA
ATGGCCCAGCCGCAGAAGCTGGGTTGAAAGAAAATGATAAAGTCTTATCGATTAATAATCAAAAAATCAAAAAATACGAA
GATTTTACAACCATTGTGCAGAAGAACCCCGAAAAGCCGTTAACGTTCGTAGTTGAGCGTAACGGCAAAGAAGAGCAACT
AACAGTGACACCAGAAAAACAAAAAGTGGAAAAACAAACGATTGGTAAAGTCGGCGTTTATCCTTATATGAAAACCGATT
TACCGTCAAAATTGATGGGCGGTATTCAGGATACTTTAAATAGTACGACACAGATTTTTAAAGCACTCGGCTCACTATTC
ACAGGCTTTAGTTTAAACAAACTAGGTGGGCCAGTCATGATGTTTAAGTTATCGGAAGAAGCATCCAATGCTGGAGTAAG
TACAGTTGTATTCTTAATGGCCATGTTGTCAATGAACTTAGGGATTATTAATTTGTTGCCGATCCCAGCTTTAGATGGCG
GGAAAATTGTCTTAAACATTATTGAAGGTGTACGTGGAAAACCAATTAGTCCTGAAAAAGAAGGCATCATTACGTTAATT
GGCTTTGGGTTTGTCATGGTGTTAATGGTGTTAGTTACTTGGAACGATATTCAACGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(208-260)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.738

100

0.545
  eeP Streptococcus thermophilus LMG 18311

53.738

100

0.545

Multiple sequence alignment