Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HUK64_RS22885 | Genome accession | NZ_CP054786 |
| Coordinates | 4928952..4929317 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain DL201330 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4923952..4934317
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUK64_RS22855 (HUK64_22835) | pyrR | 4924574..4925086 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HUK64_RS22860 (HUK64_22840) | ruvX | 4925198..4925632 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| HUK64_RS22865 (HUK64_22845) | - | 4925632..4926201 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| HUK64_RS22870 (HUK64_22850) | - | 4926250..4927143 (-) | 894 | WP_015649761.1 | energy transducer TonB | - |
| HUK64_RS22875 (HUK64_22855) | gshB | 4927290..4928243 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| HUK64_RS22880 (HUK64_22860) | pilG | 4928498..4928905 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HUK64_RS22885 (HUK64_22865) | pilH | 4928952..4929317 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HUK64_RS22890 (HUK64_22870) | - | 4929368..4929904 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| HUK64_RS22895 (HUK64_22875) | pilJ | 4929989..4932037 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| HUK64_RS22900 (HUK64_22880) | pilK | 4932098..4932973 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=400770 HUK64_RS22885 WP_003084587.1 4928952..4929317(+) (pilH) [Pseudomonas aeruginosa strain DL201330]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=400770 HUK64_RS22885 WP_003084587.1 4928952..4929317(+) (pilH) [Pseudomonas aeruginosa strain DL201330]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |