Detailed information
Bioinformatically predicted
Overview
| Name | amiC | Type | Regulator |
| Locus tag | GJS34_RS08925 | Genome accession | NZ_CP046042 |
| Coordinates | 1874262..1875761 (-) | Length | 499 a.a. |
| NCBI ID | WP_014623463.1 | Uniprot ID | A0A380JT11 |
| Organism | Streptococcus equi subsp. zooepidemicus strain TN-714097 | ||
| Function | internalize XIP (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1872009..1925163 | 1874262..1875761 | within | 0 |
Gene organization within MGE regions
Location: 1872009..1925163
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJS34_RS08915 (GJS34_08945) | amiE | 1872257..1873327 (-) | 1071 | WP_012516279.1 | ABC transporter ATP-binding protein | Regulator |
| GJS34_RS08920 (GJS34_08950) | amiD | 1873336..1874262 (-) | 927 | WP_014623462.1 | oligopeptide ABC transporter permease OppC | Regulator |
| GJS34_RS08925 (GJS34_08955) | amiC | 1874262..1875761 (-) | 1500 | WP_014623463.1 | ABC transporter permease | Regulator |
| GJS34_RS08930 (GJS34_08960) | amiA3 | 1875825..1877801 (-) | 1977 | WP_014623464.1 | peptide ABC transporter substrate-binding protein | Regulator |
| GJS34_RS08935 (GJS34_08965) | pbp3 | 1878109..1879347 (+) | 1239 | WP_014623465.1 | D-alanyl-D-alanine carboxypeptidase PBP3 | - |
| GJS34_RS08940 (GJS34_08970) | pbp3 | 1879670..1880905 (+) | 1236 | WP_014623466.1 | D-alanyl-D-alanine carboxypeptidase PBP3 | - |
| GJS34_RS08945 (GJS34_08975) | - | 1880988..1882169 (+) | 1182 | WP_038673980.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| GJS34_RS08950 (GJS34_08980) | sufB | 1882329..1883747 (-) | 1419 | WP_012516286.1 | Fe-S cluster assembly protein SufB | - |
| GJS34_RS08955 (GJS34_08985) | sufU | 1883787..1884224 (-) | 438 | WP_038673978.1 | Fe-S cluster assembly sulfur transfer protein SufU | - |
| GJS34_RS08960 (GJS34_08990) | - | 1884211..1885437 (-) | 1227 | WP_154293452.1 | cysteine desulfurase | - |
| GJS34_RS08965 (GJS34_08995) | sufD | 1885464..1886726 (-) | 1263 | WP_014623469.1 | Fe-S cluster assembly protein SufD | - |
| GJS34_RS08970 (GJS34_09000) | sufC | 1886818..1887588 (-) | 771 | WP_014623470.1 | Fe-S cluster assembly ATPase SufC | - |
| GJS34_RS08975 (GJS34_09005) | - | 1887709..1888866 (-) | 1158 | WP_038674746.1 | glycosyltransferase family 4 protein | - |
| GJS34_RS08980 (GJS34_09010) | mecA | 1888873..1889637 (-) | 765 | WP_014623472.1 | adaptor protein MecA | Regulator |
| GJS34_RS08985 (GJS34_09015) | - | 1889757..1890596 (-) | 840 | WP_014623473.1 | undecaprenyl-diphosphate phosphatase | - |
| GJS34_RS08990 (GJS34_09020) | - | 1890912..1892480 (+) | 1569 | WP_014623474.1 | ABC transporter substrate-binding protein/permease | - |
| GJS34_RS08995 (GJS34_09025) | - | 1892473..1893213 (+) | 741 | WP_014623475.1 | amino acid ABC transporter ATP-binding protein | - |
| GJS34_RS09000 (GJS34_09030) | - | 1893540..1893656 (+) | 117 | WP_012677375.1 | putative metal homeostasis protein | - |
| GJS34_RS09005 (GJS34_09035) | - | 1894171..1895061 (-) | 891 | WP_012677374.1 | SPFH domain-containing protein | - |
| GJS34_RS09010 (GJS34_09040) | - | 1895325..1896989 (-) | 1665 | WP_014623477.1 | DAK2 domain-containing protein | - |
| GJS34_RS09015 (GJS34_09045) | - | 1896989..1897354 (-) | 366 | WP_012516300.1 | Asp23/Gls24 family envelope stress response protein | - |
| GJS34_RS09020 (GJS34_09050) | rpmB | 1897506..1897694 (-) | 189 | WP_002982870.1 | 50S ribosomal protein L28 | - |
| GJS34_RS09025 (GJS34_09055) | - | 1898140..1899441 (-) | 1302 | WP_014623479.1 | ISLre2 family transposase | - |
| GJS34_RS09030 (GJS34_09060) | - | 1899591..1899890 (-) | 300 | WP_014623480.1 | hypothetical protein | - |
| GJS34_RS09035 (GJS34_09065) | - | 1899902..1901152 (-) | 1251 | WP_014623481.1 | site-specific DNA-methyltransferase | - |
| GJS34_RS09040 (GJS34_09070) | - | 1901164..1902807 (-) | 1644 | WP_038673973.1 | helical hairpin domain-containing protein | - |
| GJS34_RS09045 (GJS34_09075) | - | 1902770..1903153 (-) | 384 | WP_014623483.1 | plasmid mobilization protein | - |
| GJS34_RS09050 (GJS34_09080) | - | 1903174..1903383 (-) | 210 | WP_154224854.1 | hypothetical protein | - |
| GJS34_RS09055 (GJS34_09085) | - | 1903497..1903796 (-) | 300 | WP_014623484.1 | hypothetical protein | - |
| GJS34_RS09060 (GJS34_09090) | - | 1903848..1907087 (-) | 3240 | WP_038673969.1 | PBECR4 domain-containing protein | - |
| GJS34_RS09065 (GJS34_09095) | - | 1907126..1909171 (-) | 2046 | WP_038673967.1 | VirD4-like conjugal transfer protein, CD1115 family | - |
| GJS34_RS09070 (GJS34_09100) | - | 1909171..1909662 (-) | 492 | WP_014623487.1 | DUF3801 domain-containing protein | - |
| GJS34_RS09075 (GJS34_09105) | - | 1909684..1910466 (-) | 783 | WP_014623488.1 | hypothetical protein | - |
| GJS34_RS09080 (GJS34_09110) | - | 1910466..1910738 (-) | 273 | WP_014623489.1 | hypothetical protein | - |
| GJS34_RS09085 (GJS34_09115) | - | 1910760..1911362 (-) | 603 | WP_038673964.1 | hypothetical protein | - |
| GJS34_RS09090 (GJS34_09120) | - | 1911386..1914082 (-) | 2697 | WP_014623491.1 | phage tail tip lysozyme | - |
| GJS34_RS09095 (GJS34_09125) | - | 1914115..1914645 (+) | 531 | WP_154224853.1 | hypothetical protein | - |
| GJS34_RS09100 (GJS34_09130) | - | 1914839..1917190 (-) | 2352 | WP_014623493.1 | VirB4-like conjugal transfer ATPase, CD1110 family | - |
| GJS34_RS09105 (GJS34_09135) | - | 1917171..1917530 (-) | 360 | WP_037582122.1 | hypothetical protein | - |
| GJS34_RS10665 | - | 1917886..1918119 (-) | 234 | WP_014623495.1 | hypothetical protein | - |
| GJS34_RS09115 (GJS34_09145) | - | 1918280..1919032 (-) | 753 | WP_014623496.1 | hypothetical protein | - |
| GJS34_RS09120 (GJS34_09150) | - | 1919081..1919647 (-) | 567 | WP_014623497.1 | hypothetical protein | - |
| GJS34_RS09125 (GJS34_09155) | - | 1919752..1919979 (-) | 228 | WP_000447009.1 | hypothetical protein | - |
| GJS34_RS09130 (GJS34_09160) | - | 1920256..1923777 (-) | 3522 | WP_014623499.1 | SspB-related isopeptide-forming adhesin | - |
| GJS34_RS09135 (GJS34_09165) | - | 1923842..1924480 (-) | 639 | WP_038673957.1 | LPXTG cell wall anchor domain-containing protein | - |
| GJS34_RS09140 (GJS34_09170) | - | 1924495..1924794 (-) | 300 | WP_038673954.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 499 a.a. Molecular weight: 55634.10 Da Isoelectric Point: 10.1102
>NTDB_id=400608 GJS34_RS08925 WP_014623463.1 1874262..1875761(-) (amiC) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
MKKYIFERILRSLVSILLVTALTYTIVFTLVPKSLIFKQDPNYNKMVTTPDKKTNYLNTVFENMGYISYYSSKELQNKAS
KLDPAVTTAPTKANEKIYQKYIASIGNGWKLGRFTESKGFYAVREIPIYERVWNFFSHLVVIDHPWKIKDPKNPNLERYV
RPEIDPAVGPALVGSGTKHKYLIYFNKQFPFIHQNIITFDLGVSYPTYANIPVVQVITQGQGRTLQKEVTFPTGKTKLSS
IDIYSRTYKTPSSLDSKDIANFGKGDAYTNTQNNYAEPSMIANSFKIGIVGVLLSYLFGLPIGMLMAYYKNGWFDRFSTA
ATTFMLALPSIALIYIVRFVGSYLGLPDTFPLLGAGDVRSYVLPALILGILGTPSTVVWFRRYIVDLQGSDFVRFARAKG
LSEFEISKNHLFKQAMVPIVNGIPQAIVGTIAGATLTETVFAFPGMGKMLIDSIKAANNSMVVGLVFIFAVLSILALLVG
DILMTILDPRIKLSGKGGK
MKKYIFERILRSLVSILLVTALTYTIVFTLVPKSLIFKQDPNYNKMVTTPDKKTNYLNTVFENMGYISYYSSKELQNKAS
KLDPAVTTAPTKANEKIYQKYIASIGNGWKLGRFTESKGFYAVREIPIYERVWNFFSHLVVIDHPWKIKDPKNPNLERYV
RPEIDPAVGPALVGSGTKHKYLIYFNKQFPFIHQNIITFDLGVSYPTYANIPVVQVITQGQGRTLQKEVTFPTGKTKLSS
IDIYSRTYKTPSSLDSKDIANFGKGDAYTNTQNNYAEPSMIANSFKIGIVGVLLSYLFGLPIGMLMAYYKNGWFDRFSTA
ATTFMLALPSIALIYIVRFVGSYLGLPDTFPLLGAGDVRSYVLPALILGILGTPSTVVWFRRYIVDLQGSDFVRFARAKG
LSEFEISKNHLFKQAMVPIVNGIPQAIVGTIAGATLTETVFAFPGMGKMLIDSIKAANNSMVVGLVFIFAVLSILALLVG
DILMTILDPRIKLSGKGGK
Nucleotide
Download Length: 1500 bp
>NTDB_id=400608 GJS34_RS08925 WP_014623463.1 1874262..1875761(-) (amiC) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
ATGAAAAAATACATATTTGAACGCATATTGAGGTCGCTTGTTTCAATCCTGCTGGTAACCGCACTAACCTATACTATTGT
CTTTACCTTAGTGCCAAAAAGCTTGATTTTTAAGCAAGACCCTAATTACAATAAGATGGTGACAACACCTGATAAGAAAA
CCAATTATCTAAATACTGTTTTTGAAAATATGGGCTATATTTCCTATTACAGCAGTAAAGAACTGCAGAATAAGGCTTCA
AAGCTTGATCCTGCTGTAACAACTGCACCAACTAAGGCCAATGAAAAAATATATCAAAAATATATTGCTTCTATCGGTAA
TGGTTGGAAGCTTGGGCGCTTTACAGAAAGTAAGGGATTTTATGCGGTTAGAGAGATTCCAATCTATGAGCGCGTGTGGA
ATTTCTTTAGCCATTTGGTTGTCATTGATCACCCATGGAAAATCAAGGATCCAAAAAATCCAAATCTAGAGCGTTATGTG
CGACCAGAAATTGACCCTGCTGTTGGTCCGGCCTTAGTTGGCTCTGGTACTAAGCACAAATACTTGATTTACTTCAACAA
GCAATTCCCATTTATCCATCAAAATATCATAACCTTTGATTTGGGAGTGTCCTATCCAACTTATGCCAACATTCCGGTTG
TTCAGGTTATCACTCAAGGACAAGGAAGAACACTTCAAAAGGAGGTCACCTTCCCAACAGGAAAGACAAAATTATCATCA
ATTGATATTTACTCTAGGACTTATAAAACTCCAAGCTCTTTAGATAGCAAGGATATTGCCAATTTTGGTAAGGGTGATGC
TTATACTAATACACAAAATAACTATGCAGAACCATCTATGATTGCAAATTCCTTTAAGATTGGTATTGTCGGTGTCTTGC
TGTCCTATCTTTTTGGTCTACCAATTGGTATGCTGATGGCTTATTATAAGAATGGCTGGTTTGACCGCTTTTCAACGGCT
GCCACAACCTTTATGTTAGCCCTGCCAAGCATTGCGCTTATCTATATTGTTCGATTTGTCGGCTCTTATTTGGGCTTGCC
AGATACCTTTCCGCTACTAGGAGCAGGAGATGTTAGGTCTTATGTGCTACCTGCTCTTATATTAGGAATTCTTGGTACAC
CAAGTACAGTAGTTTGGTTCCGGCGCTATATTGTGGACCTGCAAGGCAGTGATTTTGTTCGCTTTGCACGAGCAAAGGGG
CTTTCAGAATTTGAGATTTCAAAAAATCATCTCTTTAAGCAGGCTATGGTGCCTATTGTTAACGGTATTCCACAAGCCAT
TGTCGGAACAATTGCCGGTGCAACCTTGACAGAGACCGTCTTTGCTTTCCCAGGAATGGGTAAAATGCTGATTGATTCCA
TAAAAGCTGCTAATAACTCTATGGTTGTTGGTCTTGTCTTTATTTTTGCTGTTTTATCAATATTAGCCTTGCTAGTAGGT
GATATTCTTATGACAATTTTAGATCCACGTATTAAATTATCAGGTAAAGGAGGTAAGTAA
ATGAAAAAATACATATTTGAACGCATATTGAGGTCGCTTGTTTCAATCCTGCTGGTAACCGCACTAACCTATACTATTGT
CTTTACCTTAGTGCCAAAAAGCTTGATTTTTAAGCAAGACCCTAATTACAATAAGATGGTGACAACACCTGATAAGAAAA
CCAATTATCTAAATACTGTTTTTGAAAATATGGGCTATATTTCCTATTACAGCAGTAAAGAACTGCAGAATAAGGCTTCA
AAGCTTGATCCTGCTGTAACAACTGCACCAACTAAGGCCAATGAAAAAATATATCAAAAATATATTGCTTCTATCGGTAA
TGGTTGGAAGCTTGGGCGCTTTACAGAAAGTAAGGGATTTTATGCGGTTAGAGAGATTCCAATCTATGAGCGCGTGTGGA
ATTTCTTTAGCCATTTGGTTGTCATTGATCACCCATGGAAAATCAAGGATCCAAAAAATCCAAATCTAGAGCGTTATGTG
CGACCAGAAATTGACCCTGCTGTTGGTCCGGCCTTAGTTGGCTCTGGTACTAAGCACAAATACTTGATTTACTTCAACAA
GCAATTCCCATTTATCCATCAAAATATCATAACCTTTGATTTGGGAGTGTCCTATCCAACTTATGCCAACATTCCGGTTG
TTCAGGTTATCACTCAAGGACAAGGAAGAACACTTCAAAAGGAGGTCACCTTCCCAACAGGAAAGACAAAATTATCATCA
ATTGATATTTACTCTAGGACTTATAAAACTCCAAGCTCTTTAGATAGCAAGGATATTGCCAATTTTGGTAAGGGTGATGC
TTATACTAATACACAAAATAACTATGCAGAACCATCTATGATTGCAAATTCCTTTAAGATTGGTATTGTCGGTGTCTTGC
TGTCCTATCTTTTTGGTCTACCAATTGGTATGCTGATGGCTTATTATAAGAATGGCTGGTTTGACCGCTTTTCAACGGCT
GCCACAACCTTTATGTTAGCCCTGCCAAGCATTGCGCTTATCTATATTGTTCGATTTGTCGGCTCTTATTTGGGCTTGCC
AGATACCTTTCCGCTACTAGGAGCAGGAGATGTTAGGTCTTATGTGCTACCTGCTCTTATATTAGGAATTCTTGGTACAC
CAAGTACAGTAGTTTGGTTCCGGCGCTATATTGTGGACCTGCAAGGCAGTGATTTTGTTCGCTTTGCACGAGCAAAGGGG
CTTTCAGAATTTGAGATTTCAAAAAATCATCTCTTTAAGCAGGCTATGGTGCCTATTGTTAACGGTATTCCACAAGCCAT
TGTCGGAACAATTGCCGGTGCAACCTTGACAGAGACCGTCTTTGCTTTCCCAGGAATGGGTAAAATGCTGATTGATTCCA
TAAAAGCTGCTAATAACTCTATGGTTGTTGGTCTTGTCTTTATTTTTGCTGTTTTATCAATATTAGCCTTGCTAGTAGGT
GATATTCTTATGACAATTTTAGATCCACGTATTAAATTATCAGGTAAAGGAGGTAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| amiC | Streptococcus salivarius strain HSISS4 |
62.124 |
100 |
0.621 |
| amiC | Streptococcus thermophilus LMG 18311 |
62.124 |
100 |
0.621 |
| amiC | Streptococcus thermophilus LMD-9 |
61.924 |
100 |
0.619 |