Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GJS34_RS07155 Genome accession   NZ_CP046042
Coordinates   1506378..1507187 (-) Length   269 a.a.
NCBI ID   WP_014623187.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain TN-714097     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1501378..1512187
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJS34_RS07145 (GJS34_07170) rnc 1503012..1503704 (-) 693 WP_038674782.1 ribonuclease III -
  GJS34_RS07150 (GJS34_07175) - 1503963..1505477 (-) 1515 WP_014623184.1 helix-turn-helix domain-containing protein -
  GJS34_RS07155 (GJS34_07180) vicX 1506378..1507187 (-) 810 WP_014623187.1 MBL fold metallo-hydrolase Regulator
  GJS34_RS07160 (GJS34_07185) vicK 1507191..1508543 (-) 1353 WP_014623188.1 cell wall metabolism sensor histidine kinase VicK Regulator
  GJS34_RS07165 (GJS34_07190) vicR 1508536..1509246 (-) 711 WP_012515994.1 response regulator YycF Regulator
  GJS34_RS07170 (GJS34_07195) - 1509455..1510471 (-) 1017 WP_014623189.1 DUF3114 domain-containing protein -
  GJS34_RS07175 (GJS34_07200) - 1510517..1511779 (-) 1263 WP_014623190.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30025.10 Da        Isoelectric Point: 5.5344

>NTDB_id=400592 GJS34_RS07155 WP_014623187.1 1506378..1507187(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVTQKHVFERGKTMTFGDIDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=400592 GJS34_RS07155 WP_014623187.1 1506378..1507187(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
ATGAGTGAGGTTGGTTTTAAATATAGTATTTTAGCATCAGGATCGACAGGTAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGAAAGAAAATCACCAGTCTCCTTGCTGAGATTGACAGAAGACCTGAGGATT
TGGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGTGTTGGAATCATGGCTCGAAAATATAACCTAGAT
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGACGTCACACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTATAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGCGACCGCTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGCTCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCCGGTGCCATGATTCGAAGCTTGGGCA
ATAAAACCAAGAAAATCTATCTCGGTCACCTAAGTCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGACACCTCACCAGATACCGCCTGTCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751

Multiple sequence alignment