Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HUF09_RS02175 | Genome accession | NZ_CP054623 |
| Coordinates | 460610..460975 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain DL201330 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 455610..465975
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUF09_RS02145 (HUF09_02145) | pyrR | 456232..456744 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HUF09_RS02150 (HUF09_02150) | ruvX | 456856..457290 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| HUF09_RS02155 (HUF09_02155) | - | 457290..457859 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| HUF09_RS02160 (HUF09_02160) | - | 457908..458801 (-) | 894 | WP_015649761.1 | energy transducer TonB | - |
| HUF09_RS02165 (HUF09_02165) | gshB | 458948..459901 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| HUF09_RS02170 (HUF09_02170) | pilG | 460156..460563 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HUF09_RS02175 (HUF09_02175) | pilH | 460610..460975 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HUF09_RS02180 (HUF09_02180) | - | 461026..461562 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| HUF09_RS02185 (HUF09_02185) | pilJ | 461647..463695 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| HUF09_RS02190 (HUF09_02190) | pilK | 463756..464631 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=400441 HUF09_RS02175 WP_003084587.1 460610..460975(+) (pilH) [Pseudomonas aeruginosa strain DL201330]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=400441 HUF09_RS02175 WP_003084587.1 460610..460975(+) (pilH) [Pseudomonas aeruginosa strain DL201330]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |