Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SGGBAA2069_RS02065 Genome accession   NC_015215
Coordinates   378097..378822 (+) Length   241 a.a.
NCBI ID   WP_013642694.1    Uniprot ID   -
Organism   Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 373097..383822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGGBAA2069_RS02035 (SGGBAA2069_c03430) - 373475..374896 (+) 1422 WP_013642691.1 NCS2 family permease -
  SGGBAA2069_RS02040 (SGGBAA2069_c03440) tsaE 375081..375524 (+) 444 WP_009853432.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SGGBAA2069_RS02045 (SGGBAA2069_c03450) - 375517..376029 (+) 513 WP_009853433.1 GNAT family N-acetyltransferase -
  SGGBAA2069_RS02050 (SGGBAA2069_c03460) brpA 376040..377197 (+) 1158 WP_009853434.1 biofilm formation/cell division transcriptional regulator BrpA -
  SGGBAA2069_RS02055 (SGGBAA2069_c03470) - 377315..377617 (-) 303 WP_009853435.1 hypothetical protein -
  SGGBAA2069_RS02060 (SGGBAA2069_c03480) - 377614..378033 (-) 420 WP_013642693.1 HIT family protein -
  SGGBAA2069_RS02065 (SGGBAA2069_c03490) pptA 378097..378822 (+) 726 WP_013642694.1 ABC transporter ATP-binding protein Regulator
  SGGBAA2069_RS02070 (SGGBAA2069_c03500) - 378824..379858 (+) 1035 WP_009853438.1 ABC transporter permease -
  SGGBAA2069_RS02075 (SGGBAA2069_c03510) ccrZ 379923..380717 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  SGGBAA2069_RS02080 (SGGBAA2069_c03520) trmB 380717..381355 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SGGBAA2069_RS02090 (SGGBAA2069_c03530) - 381698..382723 (+) 1026 WP_012961431.1 GGDEF domain-containing protein -
  SGGBAA2069_RS02095 (SGGBAA2069_c03550) - 382729..383796 (+) 1068 Protein_348 glycosyltransferase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26850.14 Da        Isoelectric Point: 4.4345

>NTDB_id=40035 SGGBAA2069_RS02065 WP_013642694.1 378097..378822(+) (pptA) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
MLKIENVTGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQDQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKRKAILMSTHVLDAAEKMCDRFVILHQGQIRATGTLAELREAFGDETATLNDIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=40035 SGGBAA2069_RS02065 WP_013642694.1 378097..378822(+) (pptA) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
ATGTTAAAAATTGAAAATGTAACTGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATCGGACTTTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGGATCAGGCGGAATATCGTAAGAAAATCGGATTTATCCCA
GAAACGCCAAGTTTATATGAAGAACTGACTTTACGTGAACATTTAGAAACGGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCGATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTCAATCCAAGTTTGTTTATCGTTGATGAACCCTTT
TTGGGATTGGACCCATTAGCGATTTCTGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAAGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCAAGGGCAAATTCGTGCGACTG
GTACATTAGCAGAGCTACGTGAAGCTTTTGGTGATGAGACAGCAACGCTTAATGATATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.916

99.17

0.793
  pptA Streptococcus thermophilus LMD-9

79.498

99.17

0.788

Multiple sequence alignment