Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | GJV52_RS08175 | Genome accession | NZ_CP046027 |
| Coordinates | 1610939..1611550 (-) | Length | 203 a.a. |
| NCBI ID | WP_100563211.1 | Uniprot ID | - |
| Organism | Neisseria brasiliensis strain N.177.16 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1605939..1616550
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJV52_RS08155 (GJV52_08155) | - | 1606777..1607322 (-) | 546 | WP_100563213.1 | shikimate kinase | - |
| GJV52_RS08160 (GJV52_08160) | pilQ | 1607445..1609631 (-) | 2187 | WP_095502377.1 | type IV pilus secretin PilQ | Machinery gene |
| GJV52_RS08165 (GJV52_08165) | - | 1609649..1610242 (-) | 594 | WP_095502378.1 | pilus assembly protein PilP | - |
| GJV52_RS08170 (GJV52_08170) | - | 1610264..1610938 (-) | 675 | WP_095502379.1 | type 4a pilus biogenesis protein PilO | - |
| GJV52_RS08175 (GJV52_08175) | pilN | 1610939..1611550 (-) | 612 | WP_100563211.1 | PilN domain-containing protein | Machinery gene |
| GJV52_RS08180 (GJV52_08180) | pilM | 1611552..1612658 (-) | 1107 | WP_195690030.1 | type IV pilus assembly protein PilM | - |
| GJV52_RS08185 (GJV52_08185) | - | 1612809..1615202 (+) | 2394 | WP_100563207.1 | penicillin-binding protein 1A | - |
| GJV52_RS08190 (GJV52_08190) | yihA | 1615308..1615940 (-) | 633 | WP_095502383.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
Sequence
Protein
Download Length: 203 a.a. Molecular weight: 22843.31 Da Isoelectric Point: 5.1382
>NTDB_id=400324 GJV52_RS08175 WP_100563211.1 1610939..1611550(-) (pilN) [Neisseria brasiliensis strain N.177.16]
MIELIKINLLPYREEIRQRKKQQFKILMLTALLIGLGLSALTYLSINSAIDSQQGRNAFLESEIKKLDDDLGEIKKLQAE
KENFLAKKIKVEELQENRSQAAYIIDTLNVLTPDNTYLTALEAENPTTYKVTGRAISDNKIAVFMRALPSTGVFSQPELL
SIEKVENYQEFTLRVLLTQNNAPVANLTASEATLQTTPVQEAK
MIELIKINLLPYREEIRQRKKQQFKILMLTALLIGLGLSALTYLSINSAIDSQQGRNAFLESEIKKLDDDLGEIKKLQAE
KENFLAKKIKVEELQENRSQAAYIIDTLNVLTPDNTYLTALEAENPTTYKVTGRAISDNKIAVFMRALPSTGVFSQPELL
SIEKVENYQEFTLRVLLTQNNAPVANLTASEATLQTTPVQEAK
Nucleotide
Download Length: 612 bp
>NTDB_id=400324 GJV52_RS08175 WP_100563211.1 1610939..1611550(-) (pilN) [Neisseria brasiliensis strain N.177.16]
ATGATTGAACTTATTAAAATCAACCTGCTTCCTTATCGGGAAGAGATTAGACAACGTAAAAAGCAACAGTTCAAAATATT
AATGCTGACTGCCTTGCTGATTGGCTTGGGCTTATCGGCATTGACCTATCTGAGTATTAATAGCGCCATCGATAGCCAAC
AAGGTCGCAATGCATTCCTTGAGTCGGAAATCAAAAAACTGGATGACGATTTGGGCGAAATCAAAAAGCTGCAAGCAGAA
AAAGAAAATTTCTTAGCTAAGAAAATCAAGGTTGAAGAATTGCAAGAAAACCGCTCGCAAGCGGCATATATTATTGATAC
GCTGAATGTTTTGACGCCTGACAATACCTACCTGACTGCTTTGGAAGCTGAAAATCCGACCACCTACAAAGTAACCGGCC
GCGCTATCAGCGACAACAAAATCGCCGTATTTATGCGCGCATTGCCAAGCACAGGTGTATTCTCCCAGCCCGAACTGTTA
AGCATTGAAAAAGTAGAAAACTATCAAGAATTTACTTTGCGTGTCTTACTGACTCAAAACAACGCTCCTGTGGCCAACCT
TACCGCTTCGGAAGCTACGCTTCAGACGACACCTGTACAGGAGGCAAAATAA
ATGATTGAACTTATTAAAATCAACCTGCTTCCTTATCGGGAAGAGATTAGACAACGTAAAAAGCAACAGTTCAAAATATT
AATGCTGACTGCCTTGCTGATTGGCTTGGGCTTATCGGCATTGACCTATCTGAGTATTAATAGCGCCATCGATAGCCAAC
AAGGTCGCAATGCATTCCTTGAGTCGGAAATCAAAAAACTGGATGACGATTTGGGCGAAATCAAAAAGCTGCAAGCAGAA
AAAGAAAATTTCTTAGCTAAGAAAATCAAGGTTGAAGAATTGCAAGAAAACCGCTCGCAAGCGGCATATATTATTGATAC
GCTGAATGTTTTGACGCCTGACAATACCTACCTGACTGCTTTGGAAGCTGAAAATCCGACCACCTACAAAGTAACCGGCC
GCGCTATCAGCGACAACAAAATCGCCGTATTTATGCGCGCATTGCCAAGCACAGGTGTATTCTCCCAGCCCGAACTGTTA
AGCATTGAAAAAGTAGAAAACTATCAAGAATTTACTTTGCGTGTCTTACTGACTCAAAACAACGCTCCTGTGGCCAACCT
TACCGCTTCGGAAGCTACGCTTCAGACGACACCTGTACAGGAGGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
50.495 |
99.507 |
0.502 |