Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   GJS30_RS06995 Genome accession   NZ_CP045993
Coordinates   1371734..1372390 (+) Length   218 a.a.
NCBI ID   WP_103527000.1    Uniprot ID   -
Organism   Bacillus velezensis strain LABIM22     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1366734..1377390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJS30_RS06970 (GJS30_06950) oppF 1367263..1368180 (+) 918 WP_017417453.1 oligopeptide ABC transporter ATP-binding protein OppF -
  GJS30_RS06975 (GJS30_06955) - 1368287..1369474 (+) 1188 WP_160182560.1 putative glycoside hydrolase -
  GJS30_RS06980 (GJS30_06960) - 1369592..1370170 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  GJS30_RS06985 (GJS30_06965) spx 1370349..1370744 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  GJS30_RS06990 (GJS30_06970) - 1370802..1371458 (-) 657 WP_014417421.1 TerC family protein -
  GJS30_RS06995 (GJS30_06975) mecA 1371734..1372390 (+) 657 WP_103527000.1 adaptor protein MecA Regulator
  GJS30_RS07000 (GJS30_06980) - 1372542..1373702 (+) 1161 WP_179155983.1 competence protein CoiA family protein -
  GJS30_RS07005 (GJS30_06985) pepF 1373930..1375759 (+) 1830 WP_094296111.1 oligoendopeptidase F Regulator
  GJS30_RS07010 - 1375797..1375964 (-) 168 WP_003155026.1 hypothetical protein -
  GJS30_RS07015 (GJS30_06990) spxH 1376250..1377152 (-) 903 WP_021494985.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25950.68 Da        Isoelectric Point: 4.0827

>NTDB_id=400046 GJS30_RS06995 WP_103527000.1 1371734..1372390(+) (mecA) [Bacillus velezensis strain LABIM22]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGNLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=400046 GJS30_RS06995 WP_103527000.1 1371734..1372390(+) (mecA) [Bacillus velezensis strain LABIM22]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAAGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAACTTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

88.991

100

0.89

Multiple sequence alignment