Detailed information NTG0039990

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SPNOXC_RS10890
• Genome accession: NC_017592
• Coordinates: 2020838..2021935 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae OXC141
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2015838..2026935

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPNOXC_RS10865 (SPNOXC19640)	pgsA	2016359..2016904 (-)	546	WP_000712141.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SPNOXC_RS10870 (SPNOXC19650)	rodZ	2016915..2017736 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
SPNOXC_RS10875 (SPNOXC19660)	-	2017778..2019061 (-)	1284	WP_000170216.1	pitrilysin family protein	-
SPNOXC_RS10880 (SPNOXC19670)	-	2019058..2020308 (-)	1251	WP_000424281.1	pitrilysin family protein	-
SPNOXC_RS10885 (SPNOXC19680)	yaaA	2020467..2020835 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
SPNOXC_RS10890 (SPNOXC19690)	recF	2020838..2021935 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
SPNOXC_RS10895 (SPNOXC19700)	guaB	2021986..2023464 (-)	1479	WP_000073423.1	IMP dehydrogenase	-
SPNOXC_RS10900 (SPNOXC19710)	trpS	2023616..2024641 (-)	1026	WP_000165445.1	tryptophan--tRNA ligase	-
SPNOXC_RS10905 (SPNOXC19720)	-	2024847..2026469 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=39990 SPNOXC_RS10890 WP_000266660.1 2020838..2021935(+) (recF) [Streptococcus pneumoniae OXC141]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=39990 SPNOXC_RS10890 WP_000266660.1 2020838..2021935(+) (recF) [Streptococcus pneumoniae OXC141]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46