Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   HT132_RS12270 Genome accession   NZ_CP054479
Coordinates   2514296..2515564 (-) Length   422 a.a.
NCBI ID   WP_014721183.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain R8-25     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2509296..2520564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HT132_RS12265 (HT132_12265) proS 2512569..2514263 (-) 1695 WP_061890603.1 proline--tRNA ligase -
  HT132_RS12270 (HT132_12270) eeP 2514296..2515564 (-) 1269 WP_014721183.1 RIP metalloprotease RseP Regulator
  HT132_RS12275 (HT132_12275) dxr 2515571..2516722 (-) 1152 WP_003154208.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  HT132_RS12280 (HT132_12280) - 2516778..2517575 (-) 798 WP_007409796.1 phosphatidate cytidylyltransferase -
  HT132_RS12285 (HT132_12285) - 2517579..2518361 (-) 783 WP_022553338.1 isoprenyl transferase -
  HT132_RS12290 (HT132_12290) frr 2518487..2519044 (-) 558 WP_003154212.1 ribosome recycling factor -
  HT132_RS12295 (HT132_12295) pyrH 2519047..2519769 (-) 723 WP_003154213.1 UMP kinase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46504.45 Da        Isoelectric Point: 6.8866

>NTDB_id=399894 HT132_RS12270 WP_014721183.1 2514296..2515564(-) (eeP) [Bacillus amyloliquefaciens strain R8-25]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLGKIVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLLRFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=399894 HT132_RS12270 WP_014721183.1 2514296..2515564(-) (eeP) [Bacillus amyloliquefaciens strain R8-25]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGCGGGTTCGTCCGTATGGCCGGTGAAGACCCGGAGATGATCGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
TGACGCTTTAATTATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCTTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTTGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTCTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGAGGTCATGGACCGACATC
GTGACAGCGGTAAAAGAAAATCCCGGGAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATCGCCTACGGCGCGACATCTACCGTTGATGTCACAAAAGCGATTCTGACCAATCTGGGCAAAATTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGATATGACGGATCAAGTTGCAAAAACCGGCATCAT
CAACTTATTGCGGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATCGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GACGGCTGCTGTTTTTATTCATTGAAGCGATCCGCGGCAAGCCGATTAACCGCGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4