Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   GJE05_RS08150 Genome accession   NZ_CP045960
Coordinates   1581027..1581722 (-) Length   231 a.a.
NCBI ID   WP_002228949.1    Uniprot ID   -
Organism   Neisseria meningitidis strain AUSMDU00005726     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1576027..1586722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJE05_RS08140 (GJE05_08140) - 1578299..1579105 (-) 807 WP_002228954.1 inner membrane protein YpjD -
  GJE05_RS08145 (GJE05_08145) ffh 1579326..1580696 (+) 1371 WP_002228956.1 signal recognition particle protein -
  GJE05_RS08150 (GJE05_08150) dsbA2 1581027..1581722 (-) 696 WP_002228949.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  GJE05_RS08155 (GJE05_08155) - 1581893..1582435 (-) 543 WP_002228952.1 NYN domain-containing protein -
  GJE05_RS08165 (GJE05_08165) - 1582941..1585052 (-) 2112 WP_101072684.1 TonB-dependent receptor -
  GJE05_RS08170 (GJE05_08170) - 1585238..1585843 (-) 606 WP_002223352.1 nitroreductase family protein -
  GJE05_RS08175 (GJE05_08175) - 1585892..1586290 (-) 399 WP_002216361.1 DoxX family protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25476.01 Da        Isoelectric Point: 5.1502

>NTDB_id=399716 GJE05_RS08150 WP_002228949.1 1581027..1581722(-) (dsbA2) [Neisseria meningitidis strain AUSMDU00005726]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPVELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=399716 GJE05_RS08150 WP_002228949.1 1581027..1581722(-) (dsbA2) [Neisseria meningitidis strain AUSMDU00005726]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGTTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

99.134

100

0.991

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment