Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | GJE18_RS05765 | Genome accession | NZ_CP045927 |
| Coordinates | 1161297..1162271 (-) | Length | 324 a.a. |
| NCBI ID | WP_060551125.1 | Uniprot ID | - |
| Organism | Staphylococcus agnetis strain 1379 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1156297..1167271
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE18_RS05730 (GJE18_05715) | gcvT | 1156902..1157993 (-) | 1092 | WP_107396908.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| GJE18_RS05735 (GJE18_05720) | - | 1158145..1158714 (-) | 570 | WP_107368917.1 | shikimate kinase | - |
| GJE18_RS05740 | - | 1158653..1158850 (-) | 198 | WP_037567695.1 | hypothetical protein | - |
| GJE18_RS05745 (GJE18_05725) | - | 1158834..1159316 (-) | 483 | WP_107368914.1 | competence type IV pilus minor pilin ComGF | - |
| GJE18_RS05750 (GJE18_05730) | comGD | 1159508..1159939 (-) | 432 | WP_225906114.1 | competence type IV pilus minor pilin ComGD | - |
| GJE18_RS05755 (GJE18_05735) | comGC | 1159929..1160240 (-) | 312 | WP_165886175.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GJE18_RS05760 (GJE18_05740) | comGB | 1160261..1161328 (-) | 1068 | WP_107368913.1 | competence type IV pilus assembly protein ComGB | - |
| GJE18_RS05765 (GJE18_05745) | comGA | 1161297..1162271 (-) | 975 | WP_060551125.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GJE18_RS05770 (GJE18_05750) | - | 1162328..1162951 (-) | 624 | WP_107368912.1 | MBL fold metallo-hydrolase | - |
| GJE18_RS05775 (GJE18_05755) | - | 1162966..1163277 (-) | 312 | WP_060551127.1 | MTH1187 family thiamine-binding protein | - |
| GJE18_RS05780 (GJE18_05760) | - | 1163278..1164264 (-) | 987 | WP_060551128.1 | ROK family glucokinase | - |
| GJE18_RS05785 (GJE18_05765) | - | 1164261..1164464 (-) | 204 | WP_037567684.1 | YqgQ family protein | - |
| GJE18_RS05790 (GJE18_05770) | - | 1164466..1165905 (-) | 1440 | WP_165886098.1 | rhomboid family intramembrane serine protease | - |
| GJE18_RS05795 (GJE18_05775) | - | 1165923..1166462 (-) | 540 | WP_060551130.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| GJE18_RS05800 (GJE18_05780) | rpmG | 1166575..1166739 (-) | 165 | WP_256903594.1 | 50S ribosomal protein L33 | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36974.82 Da Isoelectric Point: 7.8369
>NTDB_id=399306 GJE18_RS05765 WP_060551125.1 1161297..1162271(-) (comGA) [Staphylococcus agnetis strain 1379]
MQLLIDHVVQYAIKHEASDIHFIPNSSQVEVKLRVKDHLQCFDTLNLETYQKLLTLLKFKAGLDVSSRHKAQSGRYIYEF
ETLYYLRVSTLPLNLGSESCVIRITPQLFQADFNQTAHDIQRIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKEVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQALNLIVNQRLITTNNHSRRLVYELMSQEDIQYFLNHNFLLPKNFKSLNDKLNDLQKKGEIDAHTLR
KYQK
MQLLIDHVVQYAIKHEASDIHFIPNSSQVEVKLRVKDHLQCFDTLNLETYQKLLTLLKFKAGLDVSSRHKAQSGRYIYEF
ETLYYLRVSTLPLNLGSESCVIRITPQLFQADFNQTAHDIQRIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKEVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQALNLIVNQRLITTNNHSRRLVYELMSQEDIQYFLNHNFLLPKNFKSLNDKLNDLQKKGEIDAHTLR
KYQK
Nucleotide
Download Length: 975 bp
>NTDB_id=399306 GJE18_RS05765 WP_060551125.1 1161297..1162271(-) (comGA) [Staphylococcus agnetis strain 1379]
ATGCAACTATTAATTGATCATGTTGTTCAATATGCTATTAAACATGAGGCGTCTGATATCCATTTTATCCCTAATTCATC
ACAAGTAGAGGTCAAGCTAAGAGTTAAAGATCATTTGCAATGTTTTGACACATTAAATTTAGAAACGTATCAAAAATTGT
TAACATTATTAAAATTCAAAGCAGGCCTTGATGTTTCCTCAAGACATAAAGCACAAAGCGGTCGTTACATTTACGAATTT
GAGACTTTATACTATTTACGTGTATCAACTCTACCTCTAAATTTAGGTTCTGAAAGTTGCGTGATTCGTATCACACCTCA
ACTTTTTCAAGCAGATTTCAACCAAACTGCACATGATATACAAAGAATTATGGAAAAGAAACAAGGTTTAATTTTATTTA
GTGGTCCTACTGGTGCTGGCAAGAGTACATTAATGTACCAAATGGTGGTTTATGCAAAAGAAAAACTCAATTTAAATATC
ATTACTATCGAAGATCCTGTCGAACAATTGCTAAATGGTGTAACTCAGATTTCAGTAAATGAAAAAGCTGATATCACATA
TGGCAACTCATTAAAGGCTATTTTACGTTGCGATCCCGACGTTATCTTGATTGGTGAAATTAGAGATGGATTAATTGCTA
AGGAAGTGATTCAAGCAAGTTTAAGCGGACACTTAGTTTTATCGACCATTCATGCAAATGATTGTCAAGGTGTGTTGTTA
CGACTAATCGAAATGGGGATAACTAAACAAGATTTAATTCAGGCACTCAACTTAATTGTAAATCAAAGGTTAATTACAAC
TAATAATCATTCAAGACGCTTAGTCTACGAGTTAATGTCTCAAGAAGATATTCAATACTTTTTAAACCATAATTTTTTAC
TTCCTAAAAACTTTAAAAGTCTAAATGACAAACTTAATGATTTACAAAAGAAAGGAGAGATAGATGCGCACACACTTAGA
AAATATCAAAAATAG
ATGCAACTATTAATTGATCATGTTGTTCAATATGCTATTAAACATGAGGCGTCTGATATCCATTTTATCCCTAATTCATC
ACAAGTAGAGGTCAAGCTAAGAGTTAAAGATCATTTGCAATGTTTTGACACATTAAATTTAGAAACGTATCAAAAATTGT
TAACATTATTAAAATTCAAAGCAGGCCTTGATGTTTCCTCAAGACATAAAGCACAAAGCGGTCGTTACATTTACGAATTT
GAGACTTTATACTATTTACGTGTATCAACTCTACCTCTAAATTTAGGTTCTGAAAGTTGCGTGATTCGTATCACACCTCA
ACTTTTTCAAGCAGATTTCAACCAAACTGCACATGATATACAAAGAATTATGGAAAAGAAACAAGGTTTAATTTTATTTA
GTGGTCCTACTGGTGCTGGCAAGAGTACATTAATGTACCAAATGGTGGTTTATGCAAAAGAAAAACTCAATTTAAATATC
ATTACTATCGAAGATCCTGTCGAACAATTGCTAAATGGTGTAACTCAGATTTCAGTAAATGAAAAAGCTGATATCACATA
TGGCAACTCATTAAAGGCTATTTTACGTTGCGATCCCGACGTTATCTTGATTGGTGAAATTAGAGATGGATTAATTGCTA
AGGAAGTGATTCAAGCAAGTTTAAGCGGACACTTAGTTTTATCGACCATTCATGCAAATGATTGTCAAGGTGTGTTGTTA
CGACTAATCGAAATGGGGATAACTAAACAAGATTTAATTCAGGCACTCAACTTAATTGTAAATCAAAGGTTAATTACAAC
TAATAATCATTCAAGACGCTTAGTCTACGAGTTAATGTCTCAAGAAGATATTCAATACTTTTTAAACCATAATTTTTTAC
TTCCTAAAAACTTTAAAAGTCTAAATGACAAACTTAATGATTTACAAAAGAAAGGAGAGATAGATGCGCACACACTTAGA
AAATATCAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.824 |
99.691 |
0.586 |
| comGA | Staphylococcus aureus N315 |
58.824 |
99.691 |
0.586 |