Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   GI367_RS17260 Genome accession   NZ_CP045926
Coordinates   3547052..3547171 (+) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain AL7     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 3542052..3552171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GI367_RS17245 (GI367_17245) - 3543664..3544347 (+) 684 WP_007609386.1 response regulator transcription factor -
  GI367_RS17250 (GI367_17250) - 3544334..3545767 (+) 1434 WP_161631122.1 sensor histidine kinase -
  GI367_RS17255 (GI367_17255) rapC 3545920..3547068 (+) 1149 WP_029326229.1 Rap family tetratricopeptide repeat protein Regulator
  GI367_RS17260 (GI367_17260) phrC 3547052..3547171 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  GI367_RS17265 (GI367_17265) - 3547320..3547430 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  GI367_RS17270 (GI367_17270) - 3547510..3548874 (-) 1365 WP_007609394.1 aspartate kinase -
  GI367_RS17275 (GI367_17275) ceuB 3549288..3550241 (+) 954 WP_007609397.1 ABC transporter permease Machinery gene
  GI367_RS17280 (GI367_17280) - 3550231..3551178 (+) 948 WP_003156331.1 iron chelate uptake ABC transporter family permease subunit -
  GI367_RS17285 (GI367_17285) - 3551172..3551930 (+) 759 WP_007609404.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=399290 GI367_RS17260 WP_003156334.1 3547052..3547171(+) (phrC) [Bacillus velezensis strain AL7]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=399290 GI367_RS17260 WP_003156334.1 3547052..3547171(+) (phrC) [Bacillus velezensis strain AL7]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGAGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718

Multiple sequence alignment