Detailed information NTG0399289

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: GI367_RS17255
• Genome accession: NZ_CP045926
• Coordinates: 3545920..3547068 (+)
• Length: 382 a.a.
• NCBI ID: WP_029326229.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain AL7
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3540920..3552068

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GI367_RS17235 (GI367_17235)	-	3541317..3542000 (-)	684	WP_007609382.1	ABC transporter ATP-binding protein	-
GI367_RS17240 (GI367_17240)	-	3542015..3543451 (-)	1437	WP_007609384.1	ABC transporter permease	-
GI367_RS17245 (GI367_17245)	-	3543664..3544347 (+)	684	WP_007609386.1	response regulator transcription factor	-
GI367_RS17250 (GI367_17250)	-	3544334..3545767 (+)	1434	WP_161631122.1	sensor histidine kinase	-
GI367_RS17255 (GI367_17255)	rapC	3545920..3547068 (+)	1149	WP_029326229.1	Rap family tetratricopeptide repeat protein	Regulator
GI367_RS17260 (GI367_17260)	phrC	3547052..3547171 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
GI367_RS17265 (GI367_17265)	-	3547320..3547430 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
GI367_RS17270 (GI367_17270)	-	3547510..3548874 (-)	1365	WP_007609394.1	aspartate kinase	-
GI367_RS17275 (GI367_17275)	ceuB	3549288..3550241 (+)	954	WP_007609397.1	ABC transporter permease	Machinery gene
GI367_RS17280 (GI367_17280)	-	3550231..3551178 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
GI367_RS17285 (GI367_17285)	-	3551172..3551930 (+)	759	WP_007609404.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45406.59 Da
• Isoelectric Point: 4.9221

>NTDB_id=399289 GI367_RS17255 WP_029326229.1 3545920..3547068(+) (rapC) [Bacillus velezensis strain AL7]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFSYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=399289 GI367_RS17255 WP_029326229.1 3545920..3547068(+) (rapC) [Bacillus velezensis strain AL7]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCAGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568