Detailed information NTG0399273

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: GI367_RS12545
• Genome accession: NZ_CP045926
• Coordinates: 2606807..2607970 (-)
• Length: 387 a.a.
• NCBI ID: WP_007614106.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain AL7
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2601807..2612970

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GI367_RS12515 (GI367_12515)	-	2602071..2602490 (-)	420	WP_007614102.1	TIGR03826 family flagellar region protein	-
GI367_RS12520 (GI367_12520)	comFC	2602564..2603253 (-)	690	WP_200866785.1	phosphoribosyltransferase family protein	Machinery gene
GI367_RS12525 (GI367_12525)	-	2603259..2603543 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
GI367_RS12530 (GI367_12530)	comFA	2603601..2604986 (-)	1386	WP_007614104.1	DEAD/DEAH box helicase	Machinery gene
GI367_RS12535 (GI367_12535)	-	2605095..2605943 (-)	849	WP_007614105.1	DegV family protein	-
GI367_RS12540 (GI367_12540)	degU	2606041..2606730 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
GI367_RS12545 (GI367_12545)	degS	2606807..2607970 (-)	1164	WP_007614106.1	two-component sensor histidine kinase DegS	Regulator
GI367_RS12550 (GI367_12550)	-	2608193..2608840 (+)	648	WP_007614107.1	YigZ family protein	-
GI367_RS12555 (GI367_12555)	-	2608845..2610026 (+)	1182	WP_007614108.1	LCP family protein	-
GI367_RS12560 (GI367_12560)	-	2610129..2611205 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
GI367_RS12565 (GI367_12565)	tuaH	2611338..2612534 (-)	1197	WP_007614112.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.81 Da
• Isoelectric Point: 6.8616

>NTDB_id=399273 GI367_RS12545 WP_007614106.1 2606807..2607970(-) (degS) [Bacillus velezensis strain AL7]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEI
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=399273 GI367_RS12545 WP_007614106.1 2606807..2607970(-) (degS) [Bacillus velezensis strain AL7]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTAGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATACATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
TAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAATA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.844	99.483	0.953