Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | GI367_RS07785 | Genome accession | NZ_CP045926 |
| Coordinates | 1687663..1688700 (-) | Length | 345 a.a. |
| NCBI ID | WP_029326074.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain AL7 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1682663..1693700
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GI367_RS07735 (GI367_07735) | tasA | 1682896..1683681 (-) | 786 | WP_007612547.1 | biofilm matrix protein TasA | - |
| GI367_RS07740 (GI367_07740) | sipW | 1683746..1684330 (-) | 585 | WP_007612550.1 | signal peptidase I SipW | - |
| GI367_RS07745 (GI367_07745) | tapA | 1684302..1684973 (-) | 672 | WP_029326077.1 | amyloid fiber anchoring/assembly protein TapA | - |
| GI367_RS07750 (GI367_07750) | - | 1685232..1685561 (+) | 330 | WP_007612559.1 | DUF3889 domain-containing protein | - |
| GI367_RS07755 (GI367_07755) | - | 1685602..1685781 (-) | 180 | WP_003153093.1 | YqzE family protein | - |
| GI367_RS07760 (GI367_07760) | comGG | 1685838..1686215 (-) | 378 | WP_007612567.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| GI367_RS07765 (GI367_07765) | comGF | 1686216..1686680 (-) | 465 | WP_228767516.1 | competence type IV pilus minor pilin ComGF | - |
| GI367_RS07770 (GI367_07770) | comGE | 1686625..1686939 (-) | 315 | WP_029326075.1 | competence type IV pilus minor pilin ComGE | - |
| GI367_RS07775 (GI367_07775) | comGD | 1686923..1687360 (-) | 438 | WP_007612572.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GI367_RS07780 (GI367_07780) | comGC | 1687350..1687616 (-) | 267 | WP_042635730.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GI367_RS07785 (GI367_07785) | comGB | 1687663..1688700 (-) | 1038 | WP_029326074.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GI367_RS07790 (GI367_07790) | comGA | 1688687..1689757 (-) | 1071 | WP_007612574.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GI367_RS07795 (GI367_07795) | - | 1689954..1690904 (-) | 951 | WP_007408319.1 | magnesium transporter CorA family protein | - |
| GI367_RS07800 (GI367_07800) | - | 1691050..1692351 (+) | 1302 | WP_007612576.1 | hemolysin family protein | - |
| GI367_RS07805 (GI367_07805) | - | 1692389..1693219 (-) | 831 | WP_029326073.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39568.85 Da Isoelectric Point: 9.6787
>NTDB_id=399251 GI367_RS07785 WP_029326074.1 1687663..1688700(-) (comGB) [Bacillus velezensis strain AL7]
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDAFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGDLLQRKLIQTNQIKKMLRYPMFLISSVCVMFYILQSLIIPQFSGIYQSMNMNTSGATAFIFAFF
RHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGRLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDAFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGDLLQRKLIQTNQIKKMLRYPMFLISSVCVMFYILQSLIIPQFSGIYQSMNMNTSGATAFIFAFF
RHFHEACALALSAAFCLFLYVWFLCKKKSPQDKMLIVVKIPLLGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGRLHRELYTYSQFMMERLEQNAAKYTGILQPVIY
GVVAGMILIVYMSMLMPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=399251 GI367_RS07785 WP_029326074.1 1687663..1688700(-) (comGB) [Bacillus velezensis strain AL7]
ATGAAGCGGATTAAACGAACCTGGCCGTTGAAGGATCAAGCAGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGTCTTATTGAAGGGCTCAGACTGCTGAAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATCC
GCCGGCTGAGGGAAGGTGATGCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCTATCTGCTAT
TTCGCAGAGAAACACGGAGAATTGCCGGGGGCGATGAAACAAAGCGGCGACTTGTTACAGAGAAAGCTCATACAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATATCTTCCGTCTGTGTCATGTTTTATATCCTGCAAAGTTTAA
TTATTCCGCAGTTTTCTGGGATTTATCAATCAATGAATATGAATACATCCGGTGCGACTGCTTTCATCTTTGCGTTTTTT
CGGCATTTTCATGAAGCCTGCGCACTTGCGCTGTCCGCCGCTTTCTGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGATAAAATGCTCATTGTTGTAAAAATACCCCTCTTAGGGAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCTGGCCTTTCTATCTATGACAGCTTAACAGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGACCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCGGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAT
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
ATGAAGCGGATTAAACGAACCTGGCCGTTGAAGGATCAAGCAGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGTCTTATTGAAGGGCTCAGACTGCTGAAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATCC
GCCGGCTGAGGGAAGGTGATGCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCTATCTGCTAT
TTCGCAGAGAAACACGGAGAATTGCCGGGGGCGATGAAACAAAGCGGCGACTTGTTACAGAGAAAGCTCATACAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATATCTTCCGTCTGTGTCATGTTTTATATCCTGCAAAGTTTAA
TTATTCCGCAGTTTTCTGGGATTTATCAATCAATGAATATGAATACATCCGGTGCGACTGCTTTCATCTTTGCGTTTTTT
CGGCATTTTCATGAAGCCTGCGCACTTGCGCTGTCCGCCGCTTTCTGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGATAAAATGCTCATTGTTGTAAAAATACCCCTCTTAGGGAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCTGGCCTTTCTATCTATGACAGCTTAACAGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCAGAGATGCTCATTACACGTCTGAAAGCCGGAGAAACCATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGACCTTGCGGCTGCAGTCAGCCACGGACAGGCAAACGGCCGGCTTCACCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAACGCGGCGAAGTATACCGGCATTCTCCAGCCTGTCATTTAT
GGTGTTGTGGCCGGTATGATTTTAATTGTCTACATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
65.944 |
93.623 |
0.617 |