Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GIY05_RS02100 Genome accession   NZ_CP045916
Coordinates   455100..455507 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain CF39S     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 450100..460507
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GIY05_RS02070 - 450148..451152 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  GIY05_RS02075 pyrR 451176..451688 (-) 513 WP_003100948.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  GIY05_RS02080 ruvX 451800..452234 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  GIY05_RS02085 - 452234..452803 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  GIY05_RS02090 - 452852..453745 (-) 894 WP_003084580.1 TonB family protein -
  GIY05_RS02095 gshB 453892..454845 (-) 954 WP_003100943.1 glutathione synthase -
  GIY05_RS02100 pilG 455100..455507 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  GIY05_RS02105 pilH 455554..455919 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  GIY05_RS02110 - 455970..456506 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  GIY05_RS02115 pilJ 456591..458639 (+) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  GIY05_RS02120 pilK 458700..459575 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=399038 GIY05_RS02100 WP_003084583.1 455100..455507(+) (pilG) [Pseudomonas aeruginosa strain CF39S]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=399038 GIY05_RS02100 WP_003084583.1 455100..455507(+) (pilG) [Pseudomonas aeruginosa strain CF39S]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385

Multiple sequence alignment