Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GII23_RS04610 Genome accession   NZ_CP045858
Coordinates   1003425..1003832 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas balearica strain EC28     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 998425..1008832
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII23_RS04580 (GII23_04575) - 998648..999670 (-) 1023 WP_041108389.1 aspartate carbamoyltransferase catalytic subunit -
  GII23_RS04585 (GII23_04580) pyrR 999680..1000192 (-) 513 WP_165562577.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  GII23_RS04590 (GII23_04585) ruvX 1000208..1000639 (-) 432 WP_041108385.1 Holliday junction resolvase RuvX -
  GII23_RS04595 (GII23_04590) - 1000636..1001205 (-) 570 WP_041108383.1 YqgE/AlgH family protein -
  GII23_RS04600 (GII23_04595) - 1001266..1002159 (-) 894 WP_061339189.1 energy transducer TonB -
  GII23_RS04605 (GII23_04600) gshB 1002246..1003196 (-) 951 WP_041108379.1 glutathione synthase -
  GII23_RS04610 (GII23_04605) pilG 1003425..1003832 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  GII23_RS04615 (GII23_04610) pilH 1003878..1004243 (+) 366 WP_041108377.1 twitching motility response regulator PilH -
  GII23_RS04620 (GII23_04615) - 1004276..1004812 (+) 537 WP_041108376.1 chemotaxis protein CheW -
  GII23_RS04625 (GII23_04620) - 1004900..1006948 (+) 2049 WP_041108374.1 methyl-accepting chemotaxis protein -
  GII23_RS04630 (GII23_04625) - 1007004..1007870 (+) 867 WP_165562578.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=398709 GII23_RS04610 WP_003282729.1 1003425..1003832(+) (pilG) [Stutzerimonas balearica strain EC28]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=398709 GII23_RS04610 WP_003282729.1 1003425..1003832(+) (pilG) [Stutzerimonas balearica strain EC28]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGGACCGCTGAAACCCTGCT
GAAAAAGGTAGGGTGCGACGTCATCACCGCGGTGGATGGATTCGATGCACTGGCGAAGATCGCCGATACCCACCCCCGCA
TCATCTTCGTAGACATTATGATGCCCAGGCTGGATGGCTATCAGACCTGTGCGCTCATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTCATCATGCTCTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGGATCGTCGGGTCTGATCAGTA
TCTGACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCCCATGTGCCGGACTTCGCGCCAGTGGAGCAGG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment